Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g2080 ATGCTTGCAGAACAGAAATCCCAAAACACATACCCGACAGTCACCGAGGTATTGGAGGAAGCAAAGAGAATGACAGACATAGGGTTCCCAATAGCAGCCATGAGCCTTGTGGGGTACCTCAAAAACATGACCTTAGTTGTGTGCATGGGAAGGTTGGGAAGCCTGGAGTTAGCTGGAGGTTCTTTGGCCATAGGCTTCACCAACATAACCGGTTATTCTGTCCTCTCAGGTCTAGCCATGGGCATGGAGCCACTCTGCACCCAAGCCTTCGGTTCTCGAAACTTCTCCTTACTCTCTCTAACTTTGCAGAGAACAATTCTCATGCTACTGCTATTTTCTCTCCCCATTTCTCTTCTTTGGCTCAACCTCGAATCTCTCATGCTTTGTCTTCGTCAGAATCCAGACATAACCCGAGTAGCAACCCTCTATTGCTGCTTCGCCATTCCAGACCTCATTGCCAATTGCTTCCTCCACCCTCTTCGTATCTACCTACGCAGCAAAGGCACAACTTGGCCACTGTTGTGGTGCACTTTACTATCCATTCTTCTACACCTTCCAACCCTCACTTTTCTAACCTTCAAACTTAACCTTGGCGTACCGGGAATTGCTATTTCATCCTTTGTAGCCAATTTTAGCAACCTTTTCTTCCTTCTTTTGTACATGTTCTATACGCGTGTCCGCAAGGAGTCCTTACACGTGCCGTTACTAATGCCTCGTCACATGTCACATAATGTAACAACATGTAGCAGCACTAGTACTATTGCCAAGGAATGGGGTGTGCTAATGAAATTTTCGATACAAAGTTGTCTAGCTGTTTGCTTGGAATGGTGGTGGTACGAGTTGATGACAATTTCAGCAGGTTACCTTCATAACCCTCGTGTTTCTCTAGCCACTGCTGGCATAGTGATACAAACCACGTCTCTTATGTACACTTTGCCAACGGCATTAAGTGCATCGGTGTCAACCAGAGTAGGCAATGAACTTGGAGCGGGGCAAGGTGAAAGGGCAAGATTGTCAACGGTGGTAGCTATAGGATTAGCACTTGTAAGCTCAATTTTTGGTTTGTTGTGGACCACAATGGGAAGAGAAAGGTGGGGGAGAGTGTTCACTAGTGATAGTGAGGTGTTACAATTGACCATGGCAGTGTTACCTATAATTGGACTGTGTGAGTTAGCCAATTGTCCACAAACCACAAGCTGTGGAATCCTCAGAGGAAGTGCTAGGCCTGGTGTTGGGGCTGTTATAAACTTTTGCTCATTTTATTTGGTAGGAGCACCAGTGGCTATTGTTTTGGCCTTTTATTGGAAACTTGGGATGGTGGGTCTTTGTTATGGGTTGCTGGCAGCACAGATCGCATGTGTGGTGTCAATTTTTGTTGTGGTGTACAAAACCGATTGGGAAAGAGAGTCATTGAAGGCTACATGCTTAGTGGGAAAGAGTTCATGTGGCACATTTGCATATGAGGACCAAACTGCCGTCAAATGTGAAGGTGTTGTCTTTCTTCACAACTCCGAAAAGTGA 1521 0.4569 MLAEQKSQNTYPTVTEVLEEAKRMTDIGFPIAAMSLVGYLKNMTLVVCMGRLGSLELAGGSLAIGFTNITGYSVLSGLAMGMEPLCTQAFGSRNFSLLSLTLQRTILMLLLFSLPISLLWLNLESLMLCLRQNPDITRVATLYCCFAIPDLIANCFLHPLRIYLRSKGTTWPLLWCTLLSILLHLPTLTFLTFKLNLGVPGIAISSFVANFSNLFFLLLYMFYTRVRKESLHVPLLMPRHMSHNVTTCSSTSTIAKEWGVLMKFSIQSCLAVCLEWWWYELMTISAGYLHNPRVSLATAGIVIQTTSLMYTLPTALSASVSTRVGNELGAGQGERARLSTVVAIGLALVSSIFGLLWTTMGRERWGRVFTSDSEVLQLTMAVLPIIGLCELANCPQTTSCGILRGSARPGVGAVINFCSFYLVGAPVAIVLAFYWKLGMVGLCYGLLAAQIACVVSIFVVVYKTDWERESLKATCLVGKSSCGTFAYEDQTAVKCEGVVFLHNSEK* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g2080 506 CDD MATE_eukaryotic 20 472 IPR045069 GO:0042910|GO:1990961
Gso7g2080 506 Pfam MatE 268 429 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gso7g2080 506 Pfam MatE 30 187 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gso7g2080 506 PANTHER PROTEIN DETOXIFICATION 55 12 482 - -
Gso7g2080 506 TIGRFAM matE: MATE efflux family protein 30 442 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gso7g2080 506 PANTHER MULTIDRUG RESISTANCE PROTEIN 12 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g2080 Gso-Chr7 44699328 44702006 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g2080 K03327 - gmx:100801932 947.577
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g2080 7 44699328 44702006 Gso17g0222 17 2076378 2079287 GST
Gso7g2080 7 44699328 44702006 Gso9g0364 9 3591682 3594057 PCT
Gso9g0364 9 3591682 3594057 Gso7g2080 7 44699328 44702006 PCT