Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g2027 ATGAACGCCCTCCCTTCCTCTTCCTCTTCCACCTTCACTTTCTTAACTCAGTCCAAAAACCCCAACTACCACTTCAAGTTCACACACAAAGTACCCATTTTACCCCTACACTCGCCTTCTCCATGTTGCTCCCTGAGTGACTCGTCCTCCTCGTCGACCACGGTGCTGGACAAAAATGCCCTTTCACCCGAACAGAATTCTCGCATTGCAGGTTCGCCAGAAGACTCGAGCTCCAAGGAAAACCTCGTGGTTCGCCGGCCGGTGACGGATTTTTCCGGCGAAGACTCCGGCAAGGAGGAGGAGGAGGAGGAAGAAGAAGAAGATGACCCGAAGGCTTCGGTGATCGACGAGGGGCTCGCGAGATTCGCGAAGAAGATGCCGATGTTTGAGCCGGAGAGGATGGAATCCAAAGAGAGGCCACTCGCAATTAATTTGGACTTGGCGTTATACAGGGCGAAGCTTTTGGCTAGAAGAACATTTCAGTATGATGAAGCAGAGTCACTACTTAAAAAGTGTATAAGCTTTTGGCCTGAAGATGGTCGACCTTACGTGGTACTTGGAAAGATTTTGAGCAAGCAATCCAAAACAAGTGAAGCCAGAGAGATATACGAGAAGGGTTGCCAGGCTACTCAGGGTGAAAATGCCTACATTTGGCAGTGCTGGGCTGTTCTAGAAATGCAAATAGGAAATATCAGGAGAGCAAAAGAGTTGTTTGATGCTGCCACGGTTGCTGATAAGAGGCATGTTGCTGCTTGGCATGGATGGGCAAATCTAGAATTAAAGCAAGGAAATCTAAAGAAGGCAAGGATTCTACTTGGTAAAGGTCTTCAATATTGTGGACAGAATGAGTACATATACCAAACACTTGCACGGCTTGAAGCTAGAGCAAATAGATATCAGCAGGCTCGATACTTATTCAATCAGGCCACTAAGTGTAATCCTAATAGTTGTGCTAGTTGGCTTAGTTGGGCACAAATGGAGGTGGAACAGGAAAACTACCATGCTGCTAGGAAATTGTTTGAGAAAGCAGTACAGGCTAGTCCTAAAAATAGGTATGCTTGGCATGTATGGGGTGTTTTTGAAGCTAACATGGGCAACATTGACATGGGAAGAAAACTTTTGAAGATAGGACATAATCTAAATCCAAGGGATGCTGTTCTACTTCAATCTCTTGCTTTATTAGAATACCAATACTCAACTGCAAACGTTGCTCGGGTTTTGTTCAGGAGAGCATCTGAATTGAATCCAAGGCACCAACCTGTTTGGTTTGCTTGGGGTTGGATGGAATGGAAGGAACGGAACTTGAATAAAGCCAGAAAATTATACCAAAAAACTTTATCGATTGATCAAAACAGTGAAACTGCTGCCAGATGTCTCCAGGCTTGGGGTGTTCTGGAGCATAGGGTTGGCAATCTTTCAGCTGCTCGTAGATTATTTAAATCATCGTTGAATATAAATTCTCAGAGTTACGTGACATGGATGACTTGGGCATCCATGGAGGAAGATCAAGGAAATTCTGTTCGTGCTGAAGAGATTCGTAACCTCTATTTCCAACAGCGGACCGAAGTTGTAGATGACGCTTCATGGGTTATGGGATTCCTAGGTATTTTTGACCCGGCCATTGATAGTTTAAAGAGAATCCTCAAGCTGAACCCAAATTCGTACAACATGCCACTGGATTCTTTGAGGAACATTGCGGGAACAAATAAAAACAGAGTTGATTCTTCTAGTGACGATGAGGATGATGATGATGCAAATGGGAAAAATGACTTCGATTTGGATGCTTTCATTAAGCAAAAGCTAACCTTAGATTTGTCCAATCTAGAAATTCAGTTGGAAACACCAAAATTTTATTCTGTGAAGAGAAGTAAGTCTCCTAGAAGGATATGGCGACGATCAATTAATGGAATTGCCGAAGTGCAAGTCACACAGTAA 1935 0.4388 MNALPSSSSSTFTFLTQSKNPNYHFKFTHKVPILPLHSPSPCCSLSDSSSSSTTVLDKNALSPEQNSRIAGSPEDSSSKENLVVRRPVTDFSGEDSGKEEEEEEEEEDDPKASVIDEGLARFAKKMPMFEPERMESKERPLAINLDLALYRAKLLARRTFQYDEAESLLKKCISFWPEDGRPYVVLGKILSKQSKTSEAREIYEKGCQATQGENAYIWQCWAVLEMQIGNIRRAKELFDAATVADKRHVAAWHGWANLELKQGNLKKARILLGKGLQYCGQNEYIYQTLARLEARANRYQQARYLFNQATKCNPNSCASWLSWAQMEVEQENYHAARKLFEKAVQASPKNRYAWHVWGVFEANMGNIDMGRKLLKIGHNLNPRDAVLLQSLALLEYQYSTANVARVLFRRASELNPRHQPVWFAWGWMEWKERNLNKARKLYQKTLSIDQNSETAARCLQAWGVLEHRVGNLSAARRLFKSSLNINSQSYVTWMTWASMEEDQGNSVRAEEIRNLYFQQRTEVVDDASWVMGFLGIFDPAIDSLKRILKLNPNSYNMPLDSLRNIAGTNKNRVDSSSDDEDDDDANGKNDFDLDAFIKQKLTLDLSNLEIQLETPKFYSVKRSKSPRRIWRRSINGIAEVQVTQ* 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g2027 644 SUPERFAMILY HCP-like 330 555 - -
Gso7g2027 644 PANTHER PROTEIN HIGH CHLOROPHYLL FLUORESCENT 107 7 633 IPR044624 GO:0003729|GO:0006397
Gso7g2027 644 SMART tpr_5 456 489 IPR019734 GO:0005515
Gso7g2027 644 SMART tpr_5 249 282 IPR019734 GO:0005515
Gso7g2027 644 SMART tpr_5 317 350 IPR019734 GO:0005515
Gso7g2027 644 SMART tpr_5 180 213 IPR019734 GO:0005515
Gso7g2027 644 SMART tpr_5 283 316 IPR019734 GO:0005515
Gso7g2027 644 SMART tpr_5 215 248 IPR019734 GO:0005515
Gso7g2027 644 SMART tpr_5 146 179 IPR019734 GO:0005515
Gso7g2027 644 SMART tpr_5 419 452 IPR019734 GO:0005515
Gso7g2027 644 SUPERFAMILY TPR-like 123 395 IPR011990 GO:0005515
Gso7g2027 644 MobiDBLite consensus disorder prediction 41 115 - -
Gso7g2027 644 ProSiteProfiles TPR repeat profile. 283 316 IPR019734 GO:0005515
Gso7g2027 644 MobiDBLite consensus disorder prediction 95 112 - -
Gso7g2027 644 MobiDBLite consensus disorder prediction 41 78 - -
Gso7g2027 644 Gene3D Tetratricopeptide repeat domain 140 386 IPR011990 GO:0005515
Gso7g2027 644 Gene3D Tetratricopeptide repeat domain 388 560 IPR011990 GO:0005515
Gso7g2027 644 Pfam Tetratricopeptide repeat 224 274 - -
Gso7g2027 644 Pfam Tetratricopeptide repeat 289 350 - -
Gso7g2027 644 ProSiteProfiles TPR repeat profile. 317 350 IPR019734 GO:0005515
Gso7g2027 644 SMART hat_new_1 470 502 IPR003107 GO:0006396
Gso7g2027 644 SMART hat_new_1 399 431 IPR003107 GO:0006396
Gso7g2027 644 SMART hat_new_1 194 227 IPR003107 GO:0006396
Gso7g2027 644 SMART hat_new_1 263 295 IPR003107 GO:0006396
Gso7g2027 644 SMART hat_new_1 297 329 IPR003107 GO:0006396
Gso7g2027 644 SMART hat_new_1 229 261 IPR003107 GO:0006396
Gso7g2027 644 SMART hat_new_1 331 363 IPR003107 GO:0006396
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g2027 Gso-Chr7 44276076 44281701 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g2027 - - gmx:100801939 1219.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g2027 7 44276076 44281701 Gso17g0271 17 2450013 2455040 GST