Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1266 ATGCCTATTTCCGCGTCCCCCACAGAGGAGAGAGCCACACTCTCGTGGCGCAAAATTCCCCACTTCAAATACGACGCCGTTCAGCCCCGCCTCCGTCGCAACACCACCACCACCCTCACTTTCGCCACCGCCACCGGCGGCTCTAAATTCGCCTCCGTCTCCGTGGCGGAGCCCAAACTGCACCACGATTTCATGCCCACGCCGTCCCAGCTCTTCAAGAACCCCCTCGCCGCCTTCGCCATCGTGCCCCGTGACGCCGCTCTCTTCTCCGCCGGAGCCATCGCCGGCGCCGCCGCCAAGACCGTCACCGCGCCGCTCGACCGCATCAAGCTCCTCATGCAGACTCATGGTGTGCGTCTTGGGCAAGATAGTGCTAAGAAGGCAATAAGTTTCATTGAGGCCATAGCAGTTATAGGGAAAGAAGAAGGTATTCAAGGTTACTGGAAGGGCAACCTCCCTCAGGTGATTCGAGTTGTACCTTACAGTGCTGTCCAGCTTTTTGCTTATGAAATTTATAAGAAAATATTCAAGGGAGAGAATGGCGAGCTCTCTGTTGCAGGAAGACTTGCAGCAGGTGCTTTTGCTGGAATGACATCCACTTTTATAACTTACCCATTAGACGTTCTAAGATTGCGATTAGCTGTTGAACCTGGTTATCGGACCATGTCAGAGGTTGCCTTAAGCATGCTAAGGGAGGAAGGATTTGCATCTTTCTATCGTGGCCTTGGGCCTTCTCTAATTGCAATAGCTCCTTATATTGCAGTGAACTTTTGTGTTTTTGACTTATTGAAGAAGTCATTGCCTGAGAAATATCAAAAGCGAACTGAAACATCTATACTCACAGCTGTCCTTTCGGCATCTCTTGCTACACTTACATGCTATCCTCTGGACACTGTGCGAAGACAGATGCAATTGAAGGGCACACCTTATAAGACAGTATTAGATGCTCTTTCAGGTATTGTGGCACGAGATGGGGTTGCTGGTTTGTATCGGGGATTTGTGCCCAATGCTCTAAAATCCCTTCCTAACAGCAGCATCAAGCTTACCACATATGACATTGTTAAGCGCCTAATTTCTGCTAGCGAGAAAGAATTTCAAACAATTGCAGAGGAAAATCGCATCAAACACAAGAACACTAACAATCAATGA 1149 0.4926 MPISASPTEERATLSWRKIPHFKYDAVQPRLRRNTTTTLTFATATGGSKFASVSVAEPKLHHDFMPTPSQLFKNPLAAFAIVPRDAALFSAGAIAGAAAKTVTAPLDRIKLLMQTHGVRLGQDSAKKAISFIEAIAVIGKEEGIQGYWKGNLPQVIRVVPYSAVQLFAYEIYKKIFKGENGELSVAGRLAAGAFAGMTSTFITYPLDVLRLRLAVEPGYRTMSEVALSMLREEGFASFYRGLGPSLIAIAPYIAVNFCVFDLLKKSLPEKYQKRTETSILTAVLSASLATLTCYPLDTVRRQMQLKGTPYKTVLDALSGIVARDGVAGLYRGFVPNALKSLPNSSIKLTTYDIVKRLISASEKEFQTIAEENRIKHKNTNNQ* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1266 382 PRINTS Mitochondrial carrier protein signature 88 101 IPR002067 GO:0055085
Gso7g1266 382 PRINTS Mitochondrial carrier protein signature 101 115 IPR002067 GO:0055085
Gso7g1266 382 PRINTS Mitochondrial carrier protein signature 150 170 IPR002067 GO:0055085
Gso7g1266 382 PRINTS Mitochondrial carrier protein signature 198 216 IPR002067 GO:0055085
Gso7g1266 382 PRINTS Mitochondrial carrier protein signature 239 257 IPR002067 GO:0055085
Gso7g1266 382 PRINTS Mitochondrial carrier protein signature 282 304 IPR002067 GO:0055085
Gso7g1266 382 Pfam Mitochondrial carrier protein 278 359 IPR018108 -
Gso7g1266 382 Pfam Mitochondrial carrier protein 89 178 IPR018108 -
Gso7g1266 382 Pfam Mitochondrial carrier protein 182 269 IPR018108 -
Gso7g1266 382 Gene3D Mitochondrial carrier domain 86 367 IPR023395 -
Gso7g1266 382 PANTHER SOLUTE CARRIER FAMILY 25 10 371 - -
Gso7g1266 382 SUPERFAMILY Mitochondrial carrier 87 353 IPR023395 -
Gso7g1266 382 ProSiteProfiles Solute carrier (Solcar) repeat profile. 83 175 IPR018108 -
Gso7g1266 382 PANTHER ADP/ATP CARRIER PROTEIN 10 371 - -
Gso7g1266 382 ProSiteProfiles Solute carrier (Solcar) repeat profile. 273 357 IPR018108 -
Gso7g1266 382 ProSiteProfiles Solute carrier (Solcar) repeat profile. 183 266 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1266 Gso-Chr7 17986417 17991767 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1266 50 375 Organic Solute Cotransporters AT5G01500 79.141 1.48e-180 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1266 K14684 - gmx:100778912 699.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g0484 3 8957672 8962103 Gso7g1266 7 17986417 17991767 PCT