Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0484 ATGTCAGAATCAGAGGAGCGAGCCACGCTGACGTGGCGCAAAATCCCCATCCTCCTCAAATCCTCCCCCAACGACGTCGTTCTCGTCCCCCCCACCAGCCCCCGCAAAAACGACGCCGTCACCGGCTTCTTCGCTCCGACCAGTGGCACCCGCTGTAAATTCGCCAGCGTCTCGGTGGCAGAAAGGAAATTCGACAAAGAATTCGCGCCCACGGCGGCACAGCTTCTGCAGCACCCCCTCGCCGTCGTCGCATTGGTTCCCAAAGACGCCGCCCTCTTTCTCGCCGGCGCCCTTGCCGGCGCCGCCGCGAAATCCTTCACTGCCCCCCTCGACCGCATCAAGCTCCTCATGCAGACTCACGGCGTGCGAGTTGGACACGGAAGCGCGAAGAAGGCGATTGGTTTCATTGAGGCCTTAACTGTAATAGGGAAGGAAGAAGGCATCAAAGGTTATTGGAAGGGCAACCTCCCCCAGGTGATTCGGGTTATACCTTACAGTGCTGTCCAGCTTTTTGCTTATGAAATTTACAAGAAAATATTCAAGGGAAAGGATGGTGAGCTCTCTGTTCTGGGAAGACTTGCAGCAGGTGCTTTTGCTGGCATGACATCAACTTTTATAACTTACCCATTAGATGTCCTGAGATTACGATTAGCTGTTGAACCTGGTTATCGAACAATGTCAGAGGTTGCGTTGAGCATGCTAAGAGAGGAAGGATTTGCATCTTTCTACTATGGCCTTGGGCCTTCTCTGATTGGAATAGCTCCATATATTGCAGTGAACTTTTGTGTTTTTGATTTATTAAAGAAGTCATTGCCAGAGAAATATCAAAAGAGAACTGAAACATCTCTAGTCACTGCTGTGGTTTCTGCATCACTTGCCACACTTACATGCTATCCTCTGGATACAGTGCGAAGACAGATGCAATTGAGGGGTACACCTTATAAGACAGTATTAGATGCCATTTCAGGTATTGTGGCACGGGATGGAGTTATTGGCTTGTATCGGGGATTTGTGCCCAATGCTTTGAAAAACTTACCAAACAGCAGCATCAGGCTTACTACATATGACATTGTCAAACGCCTAATTGCAGCTAGTGAGAAAGAGTTTCAAACAATTACTGAGGAAAACCGCAACAAACAAAAGAAACCCCAATAG 1155 0.49 MSESEERATLTWRKIPILLKSSPNDVVLVPPTSPRKNDAVTGFFAPTSGTRCKFASVSVAERKFDKEFAPTAAQLLQHPLAVVALVPKDAALFLAGALAGAAAKSFTAPLDRIKLLMQTHGVRVGHGSAKKAIGFIEALTVIGKEEGIKGYWKGNLPQVIRVIPYSAVQLFAYEIYKKIFKGKDGELSVLGRLAAGAFAGMTSTFITYPLDVLRLRLAVEPGYRTMSEVALSMLREEGFASFYYGLGPSLIGIAPYIAVNFCVFDLLKKSLPEKYQKRTETSLVTAVVSASLATLTCYPLDTVRRQMQLRGTPYKTVLDAISGIVARDGVIGLYRGFVPNALKNLPNSSIRLTTYDIVKRLIAASEKEFQTITEENRNKQKKPQ* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0484 384 ProSiteProfiles Solute carrier (Solcar) repeat profile. 187 270 IPR018108 -
Gso3g0484 384 ProSiteProfiles Solute carrier (Solcar) repeat profile. 277 361 IPR018108 -
Gso3g0484 384 PANTHER ADP/ATP CARRIER PROTEIN 7 374 - -
Gso3g0484 384 PRINTS Mitochondrial carrier protein signature 92 105 IPR002067 GO:0055085
Gso3g0484 384 PRINTS Mitochondrial carrier protein signature 105 119 IPR002067 GO:0055085
Gso3g0484 384 PRINTS Mitochondrial carrier protein signature 154 174 IPR002067 GO:0055085
Gso3g0484 384 PRINTS Mitochondrial carrier protein signature 202 220 IPR002067 GO:0055085
Gso3g0484 384 PRINTS Mitochondrial carrier protein signature 243 261 IPR002067 GO:0055085
Gso3g0484 384 PRINTS Mitochondrial carrier protein signature 286 308 IPR002067 GO:0055085
Gso3g0484 384 ProSiteProfiles Solute carrier (Solcar) repeat profile. 87 179 IPR018108 -
Gso3g0484 384 SUPERFAMILY Mitochondrial carrier 90 357 IPR023395 -
Gso3g0484 384 Gene3D Mitochondrial carrier domain 90 362 IPR023395 -
Gso3g0484 384 Coils Coil 362 382 - -
Gso3g0484 384 PANTHER SOLUTE CARRIER FAMILY 25 7 374 - -
Gso3g0484 384 Pfam Mitochondrial carrier protein 281 363 IPR018108 -
Gso3g0484 384 Pfam Mitochondrial carrier protein 186 273 IPR018108 -
Gso3g0484 384 Pfam Mitochondrial carrier protein 92 182 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0484 Gso-Chr3 8957672 8962103 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0484 5 381 Organic Solute Cotransporters AT3G51870 69.713 0.0 521
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0484 K14684 - gmx:100796878 731.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g0484 3 8957672 8962103 Gso3g0484 3 8957672 8962103 ECH
Gso3g0484 3 8957672 8962103 Gso7g1266 7 17986417 17991767 PCT