Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1247 ATGCTTGATCACAAACATACCAAGATATCTATATTCTCTTTTATCACATTCTCAGCCATATTTTATCTCATGCTCTGTGATTTTCTTATCTACCACGATTCCCTACACCCTGGAACACTAGTAGAAGTGCTGCAACACAGAAATGGAGAAGGGATAAGGTCAACTTTGACTCTCTCACACACCCCTTTACGTTCCATGCAAGAAGAGAACGAAGGAGTTGGTGACAGAAACCATGGAGTACTAGTTGCTCCACTTAATGCCAATGAAGAAGAGAGAATTGCATGGTTTAGAGGGAAGCTTCGCGAATTCAAGATTCTCAATTCAGACAAGTTGAGCAGGCGATTCCATGCTCGGGTTCTGCGATTTTTCAGCCACGAATGCGAGTCTCGATTTTTCATGATTTGGGAGTCCCCTGCAGGCTCATTTGGCGCAAGAGAATTGATGTCCATAGATAGTGTTTTCAAGGTGCATCCCAAGGCATGCTTGGTGATTCTATCAAGGACTTTGGACACCATCCGTAGCTATAGGGTCCTTAAGCCAATTCTTGATGAAGGGTTCAAAGTTCAACCAGTGACCCCAGACTTGCAATTTCTCTTCAAGGGGACTCCAGCTGAAGCATGGTTGAATGAGTTGAAGAAAGGGAAGAAGGACCCTGGTCAGATTTCTCTCTTTCAGAATCTATCAAACTTGATTAGACTTGCAGTTTTGTACAAATATGGTGGTGTCTACCTAGACATAGATTTTGTAGTCTTGAAACCTTTATCTTTGTTGAGGAATTCTATTGGAGCACAAAGCATGGATGCTGGGAATAAGCACTGGACTAGACTAAACAATGCAGTTCTGATATTTGACATGAATCATCCACTTCTTCTCAGATTCATTGATGAATTTGTGTTGACTTTTGATGGGAACAGATGGGGGCATAATGGTCCCTACCTTGTTTCCAGAGTGGTTAAGAGACTAGGGGAAAAGCCAGGCTTCAATTTTACAATCTTGCCTCCTATAGCCTTTTATCCAGCAGATTGGAAAAAGATTGGTGGTCTCTTTAGGAAGCCAAAAACTAGAAGTGAATCAAAATTGGTTGATGCCAAACTGCTTCAGCTCAGTGGTGAGAGTTATGGGGTGCATCTATGGAACAAAGAAAGTAGGAGATTGAAGATTGAAGAAGGAAGTGTCATGGAAAGACTAATATCTAATCATTGTGTTACTTGCAAAAACTTAGGCTTCATTTCACCAACCAAGCTTTGA 1248 0.4151 MLDHKHTKISIFSFITFSAIFYLMLCDFLIYHDSLHPGTLVEVLQHRNGEGIRSTLTLSHTPLRSMQEENEGVGDRNHGVLVAPLNANEEERIAWFRGKLREFKILNSDKLSRRFHARVLRFFSHECESRFFMIWESPAGSFGARELMSIDSVFKVHPKACLVILSRTLDTIRSYRVLKPILDEGFKVQPVTPDLQFLFKGTPAEAWLNELKKGKKDPGQISLFQNLSNLIRLAVLYKYGGVYLDIDFVVLKPLSLLRNSIGAQSMDAGNKHWTRLNNAVLIFDMNHPLLLRFIDEFVLTFDGNRWGHNGPYLVSRVVKRLGEKPGFNFTILPPIAFYPADWKKIGGLFRKPKTRSESKLVDAKLLQLSGESYGVHLWNKESRRLKIEEGSVMERLISNHCVTCKNLGFISPTKL* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1247 415 Pfam Alpha 1,4-glycosyltransferase conserved region 283 405 IPR007652 -
Gso7g1247 415 PANTHER ALPHA 1,4-GLYCOSYLTRANSFERASE FAMILY PROTEIN 5 406 - -
Gso7g1247 415 SUPERFAMILY Nucleotide-diphospho-sugar transferases 129 404 IPR029044 -
Gso7g1247 415 Gene3D - 133 329 - -
Gso7g1247 415 Pfam Glycosyltransferase sugar-binding region containing DXD motif 145 265 IPR007577 -
Gso7g1247 415 PANTHER ALPHA 1,4-GLYCOSYLTRANSFERASE FAMILY PROTEIN 5 406 IPR044789 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1247 Gso-Chr7 17779415 17781622 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1247 8 407 Glycosyltransferase AT2G38150 49.510 1.00e-137 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1247 K01988 - gmx:100812965 834.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g1247 7 17779415 17781622 Gso1g0970 1 39642549 39644003 PCT
Gso1g0970 1 39642549 39644003 Gso7g1247 7 17779415 17781622 PCT