Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0970 ATGTTTGTTCATCGGCTGCTTAAACATGCCAAGTTATCTGTCCTCCCTCTAATCACTTTCTCTGCCATAATTTTTCATATCTATGCAGATGGTATTGTCTACCATGATTCCCTACACTCTGCTGCTAATACCGAAGCTCCAGAGAAGTTAGAAGTTCACAATCACAGAACAAAAGGAATAGGGTCAACCCTTGTTCACATACCTTTACATTCCATTCAAGAGAAGGATGAAGCCAACAGTCGAAACCAGAAGGCTCTAGTTGCCCCATTCAATGCCACAGAAGAAGAAAGAATAGCATGGCTTCAAGGACAGCTGCATAACTTCAAGATCTTCAAGTCGAACAACTTGACCCGACAATTTAATGCTCGAGTTTTGGGATTTTTAGGCCGCAAATGCGAGGTTCAGTTTTTCATGACTTGGATTTCACCTGCAAGTTTATTTGGAGGGAGAGAATTGCTGTCTGTGGAAAGCATTTTCAAGAACCATCCCAAGGCATGTCTGATAATTCTATCAAGAACTTTGGACAGCAGACATGGCTACAGGATCCTGAAACCACTGCTTGATCGTGGGTTCAAAGTGCAGGCAACAGCCCCGGACTTGTCATTTTTGGTCAAGGGGACTCCAGTTGAAGCTTGGTTTCGTGAGCTAAGGAAGGGTAGAAAGGACCCCGGTGAGATTCCTTTGTCTCAGAATCTATCAAATCTGATAAGACTTGCAGTTCTCTACAAATATGGTGGTATCTACATAGATACAGATTTTATAGTTCTGAAACCATTAACAGGGTTAAGAAATTCTATTGGTGCGCAGAGCATGAATTTGGATTCTAAGCACTGGACCAGATTAAATAATGCAGTTCTGATTTTTGATATTGGACATCAACTTCTGCATAGATTCATCAATGAATTTGCATTAACTTTTGATGGAAACAAATGGGGACATAATGGTCCCTACCTGGTTTCCAGAGTGATTAAGAGGCTGGGGAAAAGACATGATTTCAACTTTACAGTCTTGCCACCTATGGCCTTTTATCCGGTGGACTGGAACAAGATAAATGGGCTTTTTATGAAGCCGAAAACTCAGGAAGAATCAAAATGGGTAGAAGCCAAACTGCTTCAGCTCAGAAGAAAGACTTATGGGATTCATCTATGGAACAAACATAGTAGCAGATTGACAATTGAAGAAGGAAGTATCATGGGAAGACTTGCATCAGATTATTGTGTCATTTGTAACAAATGGGTATAG 1242 0.409 MFVHRLLKHAKLSVLPLITFSAIIFHIYADGIVYHDSLHSAANTEAPEKLEVHNHRTKGIGSTLVHIPLHSIQEKDEANSRNQKALVAPFNATEEERIAWLQGQLHNFKIFKSNNLTRQFNARVLGFLGRKCEVQFFMTWISPASLFGGRELLSVESIFKNHPKACLIILSRTLDSRHGYRILKPLLDRGFKVQATAPDLSFLVKGTPVEAWFRELRKGRKDPGEIPLSQNLSNLIRLAVLYKYGGIYIDTDFIVLKPLTGLRNSIGAQSMNLDSKHWTRLNNAVLIFDIGHQLLHRFINEFALTFDGNKWGHNGPYLVSRVIKRLGKRHDFNFTVLPPMAFYPVDWNKINGLFMKPKTQEESKWVEAKLLQLRRKTYGIHLWNKHSSRLTIEEGSIMGRLASDYCVICNKWV* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0970 413 PANTHER ALPHA 1,4-GLYCOSYLTRANSFERASE FAMILY PROTEIN 2 411 IPR044789 -
Gso1g0970 413 Pfam Glycosyltransferase sugar-binding region containing DXD motif 150 270 IPR007577 -
Gso1g0970 413 Gene3D - 171 343 - -
Gso1g0970 413 PANTHER ALPHA 1,4-GLYCOSYLTRANSFERASE FAMILY PROTEIN 2 411 - -
Gso1g0970 413 Pfam Alpha 1,4-glycosyltransferase conserved region 288 411 IPR007652 -
Gso1g0970 413 SUPERFAMILY Nucleotide-diphospho-sugar transferases 110 411 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0970 Gso-Chr1 39642549 39644003 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0970 7 409 Glycosyltransferase AT2G38150 47.407 6.23e-133 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0970 K01988 - gmx:100781975 845.114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g1247 7 17779415 17781622 Gso1g0970 1 39642549 39644003 PCT
Gso1g0970 1 39642549 39644003 Gso7g1247 7 17779415 17781622 PCT