Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1180 ATGGATAGTACTTTCACCCAACAAGAAGTGAGAGAGCAAACCCAACAACATCAACATCAGAAGAAGCATTGTGGCCCTTTGGTGAGGCTCAGTAGAAGGTCCACTAATCCTAACCCATTTTCCATTCTGGTGTTCTGGGTGTCTAAATCTCTTAGAAGTTTGTGTTTCAGAGTTCAGCTCTCACAACAAGGGTTTTGCTTGAGGAGGATTCAGTACCATCATGGCATGGTGATTAACACCCCTGTTCTCCATGCTTCTTCTTCTTCTGAAGAAGAAGAAGAAGAAGGGAAAGCTTCTCATGCTGCAATGGAGGGTTTGAGTTTGGCTGAGAAGAGTACTGAGGCTGTTGAAGAAAGTAATAAAGGAATTGAAAATGGTTCAAAGAGAGAAACTTTTGCTGATTTGATTGAAGAAAAGGGTCGTGAGAGCAGTTTCAGCTCTGAGTTTCTGTCATCTGAGACCACTCATGGCGAGCATAGTAGGAGTAGCACTGAGGACTCATCTTCATCTCCTTCTGTGGGGTGGCCGGTTCAGGAAATTGCTGCATCTGATTGTGCTAGTCCTCATGGAAGTGAAGATGGTGAGAAGAAGCACTTGGTTTTGGAGAATAAGGAGTTTGAGAAACGAGTTTCAGCCTTGCCAGAGGTTGAGATGATGAAGGAGAGGTTTGCAAAATTGTTACTTGGAGAAGATATGTCAGGTTGCGGAAATGGGGTCACTACAGCCCTGGCTATTTCAAATGCCATAACCAATCTATGTGCTACCCTCTTTGGGCAACTTTGGAGATTAGAGCCCCTACGTTCAGAGAAGAAAGCAATGTGGCGACGAGAAATAGAGTGGTTTCTTTCTGTCAGTGATCATATAGTTGAATTGACACCTAATTGGCAGACCTTTCCAGATGGAAGCAAGCTTGAGGTCATGACCTGTCGACCACGCTCAGATCTTTATGTCAATCTTCCAGCTCTGCGCAAATTAGATAACATGCTTCTTGAAATTCTAGATAGTTTTGTCAATACAGAGTTCTGGTATATAGACCAAGGGGTTCTAGCTCCAGATGCTGATGGTCCATCTTCTTTTCGACAAGCACTTCAGCGACAGGAGGAGAAATGGTGGCTTCCTGTACCGCGAGTCCCTCCATGTGGCCTAAATGAAAACTCAAGGAAGCAGTTGCAGCACAAGCGTGATTCCACAAACCAAATATTAAAGGCTGCAATGGCCATTAACAGCATCACTTTAGCTGAAATGGACATCCCTGAGTCCTATTTGGAATCTCTTCCAAAGAATGCTAGAGTAAGCTTGGGGGATGTTATTTATCGTTATATCACATCGGATCATTTCTCTCCTGAGTGCTTGCTAGCTTGCCTTGATTTATCTTCTGAGCATCAAGCTATAGAGATTGCGAACCGAGCCGAGGCTTCCATGTATATTTGGCGTAAAAGGACAAACTCCAAGCCTGCCAGTATCAGTGCCAGGTCTAGTTCAAGAACATCATGGGAAATGGTCAAGGATCTGATGGTTGATGCAGACAAAAGGGATTTGTTTGCAGAGAGAGCAGAAAGCCTTTTGCTTTCCTTGAAGCAGCGTTTTCCTGGTCTCCCTCAAACAGCCTTGGATATGAGCAAAATCCAATACAACAAGGATATTGGGAAAGCCATTCTGGAGAGCTACTCTCGCGTGCTAGAGAGTTTGGCGTTTAACATGGTAGCGCGAATTGATGATGTGCTCTATGTAGACGACTTGACCAAAAATTCAGATAAAATCTCATCTCTCTCAAAAGTTGGTGTAGTTACTCACAAGAGTATATCAGTTCCACACTCAGTGCCTATCCCAGGCACTCCATATAAATCGGCTTTCGGCACGCCAACCCTTTCTCCAGCACATGGGATTAGTAGTCCTGCCAAGCTAGGGAAGTCCCCACTCATCAATGACAGCAACCTTCCCCAAAGAGGGTCAGGGATCAAGAAGTCTTTGACTGATTTTCTTAGCATTGATCCAAAAGGGAAGGAAAGTGGCAGTTCAATTGAGAAACAAGTTCCAGAATCAAATACACTTGATGAAGTGACAACATGTGAAACAGATGTGGAGTCCAGTGATTGCACAGAAGGTGGTGCCAGCCCAAGTATCTTGGACCGGAAATGGCACGTGTGA 2148 0.4446 MDSTFTQQEVREQTQQHQHQKKHCGPLVRLSRRSTNPNPFSILVFWVSKSLRSLCFRVQLSQQGFCLRRIQYHHGMVINTPVLHASSSSEEEEEEGKASHAAMEGLSLAEKSTEAVEESNKGIENGSKRETFADLIEEKGRESSFSSEFLSSETTHGEHSRSSTEDSSSSPSVGWPVQEIAASDCASPHGSEDGEKKHLVLENKEFEKRVSALPEVEMMKERFAKLLLGEDMSGCGNGVTTALAISNAITNLCATLFGQLWRLEPLRSEKKAMWRREIEWFLSVSDHIVELTPNWQTFPDGSKLEVMTCRPRSDLYVNLPALRKLDNMLLEILDSFVNTEFWYIDQGVLAPDADGPSSFRQALQRQEEKWWLPVPRVPPCGLNENSRKQLQHKRDSTNQILKAAMAINSITLAEMDIPESYLESLPKNARVSLGDVIYRYITSDHFSPECLLACLDLSSEHQAIEIANRAEASMYIWRKRTNSKPASISARSSSRTSWEMVKDLMVDADKRDLFAERAESLLLSLKQRFPGLPQTALDMSKIQYNKDIGKAILESYSRVLESLAFNMVARIDDVLYVDDLTKNSDKISSLSKVGVVTHKSISVPHSVPIPGTPYKSAFGTPTLSPAHGISSPAKLGKSPLINDSNLPQRGSGIKKSLTDFLSIDPKGKESGSSIEKQVPESNTLDEVTTCETDVESSDCTEGGASPSILDRKWHV* 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1180 715 MobiDBLite consensus disorder prediction 664 715 - -
Gso7g1180 715 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 103 663 IPR038937 GO:0005085
Gso7g1180 715 MobiDBLite consensus disorder prediction 114 131 - -
Gso7g1180 715 MobiDBLite consensus disorder prediction 1 31 - -
Gso7g1180 715 MobiDBLite consensus disorder prediction 674 703 - -
Gso7g1180 715 MobiDBLite consensus disorder prediction 109 131 - -
Gso7g1180 715 ProSiteProfiles PRONE domain profile. 206 588 IPR005512 GO:0005085
Gso7g1180 715 Gene3D PRONE domain, subdomain 1 448 588 - -
Gso7g1180 715 Gene3D PRONE domain, subdomain 1 207 447 - -
Gso7g1180 715 MobiDBLite consensus disorder prediction 143 175 - -
Gso7g1180 715 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 215 582 IPR005512 GO:0005085
Gso7g1180 715 PANTHER PRONE DOMAIN-CONTAINING PROTEIN-RELATED 103 663 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1180 Gso-Chr7 16549119 16553496 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1180 - - gmx:100800673 1368.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1529 18 45628493 45633056 Gso7g1180 7 16549119 16553496 GST
Gso7g1180 7 16549119 16553496 Gso3g0615 3 17892545 17897423 PCT