Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0615 ATGTATCCATCTACCCTTCACTATCAAACATTGTTGACAACTTATGAAAGGTGTCCCAGCCTCGCCAAAGTTTTCACAACTTTCAAAAGGGTCTTGCAAGAGAAGGACTTCACATGTTGGCATGGTAACAACAAACAACAACAACACCGTTTTCTAGCCTGCGGCAGGTTTTGTGTAGGAGGGAAAGCAGCAATGGAAGATGAGGCTTTGATTGATTATAAGAGTGAAGGTGTTGAAGGAAGCATAGAATGTGAAAGTGGTTGCAATGATGAGAGTTTTGCTGATTTGATTAAAGAAAAGGGTGGAGAGAGAAGTTCCAACTCTGAAATTCTTTTATCTGAGATGACAGAATTTGATGGTCAGAGTCAAGGTAGTGCAGAAGATACATCTTCATCAACTTCAATGGGGTTTCAGGAAATGTCTGCATCTAATAGTACAAGTCCACGTGGAAGTGAAGATGCAGAGAAAAAGGACTTGTGTAATGAGAATTTTGAGGAGCAAGTATCTGGGTTATCAATGTCAGTGCTAGAGCATGAATTGATGAAGGAAAGGTTTGCAAAATTGTTACTTGGAGAAGATATGTCAGGTAGTGGAAATGGAGTCCCTGCAGCCTTGACTATATCCAATGCCATCACTAATCTATGTGCCACCCTCTTTGGGCAACTTTGGAGATTGGAGCCACTGGCACCAGAAAAGAAAGCAATGTGGCGACGAGAGATGGAGTGTCTTCTTAGTGTCAGTGATTATATTGTTGAATTGAAGCCTACATGGCAAACATTTCCAGATGGAAGCAAACTTGAGGTCATGACCACTAGACCTAGGTCAGATCTTTATGTCAACCTGCCAGCTTTGAGGAAATTAGATAACATGCTTCTGGAAATTCTGGATAGTTTTGTTGATCCGGAGTTTAGGTATGTTGACCAAGGGGTTCTTGCCCCAGATGCAGATGGTTCATCTTCGTTCCGCCAAGCTCTTCAGCGGCTAGAAGAGAAATGGTGGCTCCCTGTACCTCAAGTCCCTCCTTCTGGTCTCCATGAAGATTCCAGAAAGCAGTTGATGCACAAAAGGGATAGTACAAAGCAGATATTAAAAGCTGCAATGGCAATTAACAGCATTACTTTAGCTGACATGGAGATCCCTGATACATACTTGGAATCTCTTCCAAAGACTGCAAGAGCCAGCTTGGGGGATGTCATTTACAGATATATTACAACAGACAATTTTTCTCCTGAGTGTTTGCTATCTTGCCTTAATTTATCATCTGAACATCAAGCCATAGAGATTGCCAACAGAGTAGAGGCTTCCATTTATATTTGGCGAAAAAAGATGAACTCAAGGCCTACTACTACAGGTCGCACTACAAGATCCAGTTCAAGATCATCATGGGAAATCTTCAAGGATCTGATTGTTGAGGGAGATAAAATGGAAACACTTGTAGAAAGAGCAGAAAGCCTTCTACTCTCCTTGAAGCAGCGTTTTCCTGCTCTTCCTCAAACAGCCTTGGATATGAGCAAAATCCAATGCAACAAGGATGTTGGCAAATCCATTTTAGAGAGCTACTCAAGAGTACTAGAGAGTTTGGCATCCAACATTGTAGCACGAATTGATGATGTGCTCTATGTTGATGACTTGACAAAGCACTCTGATGGTGTAATTGCTCACACGACCATTTCAATTCCACACTCAATGTCTGGCCAAAGCACTCCTCCTCCATCATATAAGTCATCTTTAGGCACACCAAACTTTTCTCCGGCACGATGTGTTAGTCCTGCAAAGGGATCAAAGTCACCATTCATCAACAGTAGCAACCTTCCCCAAAGAGGGGTAGGAGTTAGCAAAGTTTTGACTCATTTTGGTGGCATTGAGAGGAAAGAGAAGTTTGTTCCAACCTTGAAAACATTTGATGAAGTTCCATTTAGAACATTTGATGAAACAGATATGGAGTCCAGTGATTGCACAGAAGAAGATGTTAAGCTCAATGTGTTGGACAGGGCATGGTTAGAGTGA 2007 0.419 MYPSTLHYQTLLTTYERCPSLAKVFTTFKRVLQEKDFTCWHGNNKQQQHRFLACGRFCVGGKAAMEDEALIDYKSEGVEGSIECESGCNDESFADLIKEKGGERSSNSEILLSEMTEFDGQSQGSAEDTSSSTSMGFQEMSASNSTSPRGSEDAEKKDLCNENFEEQVSGLSMSVLEHELMKERFAKLLLGEDMSGSGNGVPAALTISNAITNLCATLFGQLWRLEPLAPEKKAMWRREMECLLSVSDYIVELKPTWQTFPDGSKLEVMTTRPRSDLYVNLPALRKLDNMLLEILDSFVDPEFRYVDQGVLAPDADGSSSFRQALQRLEEKWWLPVPQVPPSGLHEDSRKQLMHKRDSTKQILKAAMAINSITLADMEIPDTYLESLPKTARASLGDVIYRYITTDNFSPECLLSCLNLSSEHQAIEIANRVEASIYIWRKKMNSRPTTTGRTTRSSSRSSWEIFKDLIVEGDKMETLVERAESLLLSLKQRFPALPQTALDMSKIQCNKDVGKSILESYSRVLESLASNIVARIDDVLYVDDLTKHSDGVIAHTTISIPHSMSGQSTPPPSYKSSLGTPNFSPARCVSPAKGSKSPFINSSNLPQRGVGVSKVLTHFGGIERKEKFVPTLKTFDEVPFRTFDETDMESSDCTEEDVKLNVLDRAWLE* 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0615 668 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 177 546 IPR005512 GO:0005085
Gso3g0615 668 PANTHER PRONE DOMAIN-CONTAINING PROTEIN-RELATED 65 668 - -
Gso3g0615 668 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 65 668 IPR038937 GO:0005085
Gso3g0615 668 Gene3D PRONE domain, subdomain 1 413 552 - -
Gso3g0615 668 Gene3D PRONE domain, subdomain 1 172 412 - -
Gso3g0615 668 MobiDBLite consensus disorder prediction 117 157 - -
Gso3g0615 668 MobiDBLite consensus disorder prediction 117 149 - -
Gso3g0615 668 ProSiteProfiles PRONE domain profile. 168 552 IPR005512 GO:0005085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0615 Gso-Chr3 17892545 17897423 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0615 - - gmx:100788452 1157.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g0615 3 17892545 17897423 Gso3g0615 3 17892545 17897423 ECH
Gso18g1529 18 45628493 45633056 Gso3g0615 3 17892545 17897423 PCT
Gso7g1180 7 16549119 16553496 Gso3g0615 3 17892545 17897423 PCT