Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1058 ATGGACTTACAAGGTGCTGTTAAGGACATAATTGCTTGGGATGGTACTCTCTCTTCAAGTGATTTTTCCCTTTCTGCTCATACATTTTCTGAGAAGTGGAAAAGGTTCAATCCTTCCTTTCCTCCATGGCAGTGGATCCCATGTTTAAAACATCATTTGGTTGCTTCTCATAAGGTGGAAGGATACTTATCCCTGGAGAACATGTGCCATATCAAATCAAGTGAGGAAGAAGAGAGTGATAGAAGTCTGACATGGAAAGAAGAGAGCAACATCTCACAGAGAGAAGAGCCCTTTGATAATGCAGCTTTAGTATGTCCAGAGCATGAAGTAAACCAGTACGATTTTCATATCGTCTACAGTGCTACATATAGAGTTCCAGTCTTGTACTTCCGTTCATATCATGGTGATGGGCAACTTTTGCCGTTTGATGAAATTGAAAAGGACCTTCCTGGTCACTCTGCGAAGTTACGATCAGAATCCAAATGGACATTTATATCTCATGAGGAACATCCATATTTGAACAGGCCATGGTACAAATTACATCCATGTGGGACAAGTGACTGGATGAAGCTTCTCTTCAATGGTGATTCATCTTTGAATAAAAAGGATTTTGTTATTGAACAATATCTGGTTTCCTGGTTCTCGGCCATTGGGCTAGTCGTCGGTCTTAAAATGCCTTTGGAAATGCTGGATACTGTAGTTTCTAACAATTCTTAG 717 0.4031 MDLQGAVKDIIAWDGTLSSSDFSLSAHTFSEKWKRFNPSFPPWQWIPCLKHHLVASHKVEGYLSLENMCHIKSSEEEESDRSLTWKEESNISQREEPFDNAALVCPEHEVNQYDFHIVYSATYRVPVLYFRSYHGDGQLLPFDEIEKDLPGHSAKLRSESKWTFISHEEHPYLNRPWYKLHPCGTSDWMKLLFNGDSSLNKKDFVIEQYLVSWFSAIGLVVGLKMPLEMLDTVVSNNS* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1058 238 Pfam Autophagocytosis associated protein, active-site domain 29 226 IPR007135 GO:0019787
Gso7g1058 238 PANTHER UBIQUITIN-LIKE-CONJUGATING ENZYME ATG3 10 229 IPR007135 GO:0019787
Gso7g1058 238 Gene3D - 56 221 - -
Gso7g1058 238 PANTHER AUTOPHAGY-RELATED 10, ISOFORM B 10 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1058 Gso-Chr7 14782739 14786177 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1058 K17888 - gmx:100786914 505.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g1058 7 14782739 14786177 Gso3g0832 3 30305841 30310568 GST