Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0832 ATGGACTTAAAAGATGATGCTGTTAAGGGCATAGTCCCTTGGGATGGGACTCTCTCTTCATTTGATTTTTCCCTTTCTGCTCATACATTTTCTGACAAGTGGAAAAGGTTCAATCCTTCATTTCCTGCTTGGCAGTGGATCACATGTCCAAAACAACATCATTTGGTTGCTTCTCATAAGGTGGAAGGATACTTATCCCTGGAGAACATGTGCCATATCAAATCAAGTCAGTCATTACAGGAACAAGAGAGTGATAGAAGTCTCACATGGAAAGAAGAGTCCAACATCTCACAGAGAGAAGAGCCCTTTGATAAAGCAACTTTAGTATGTCCAGAGCATGAAGTAAACCACTATGATTTTCATATTGTCTACAGTGCTTCATATAGAGTTCCAGTCTTGTACTTCCGTTCGTACCGTAGTGATGGGCAACTTTTGCCGTTTAATGAAATTGAAAAGGACCTTCCTGGTCACTCTGCAAAGTTACGGTCAGAATCCAAATGGACATTTATAACTCACGAGGAACATCCATATTTGAACAGGCCATGGTACAAATTACATCCATGTGGGACAAGTGACTGGATGAAGCTTCTCTTTCATAGTGACTCATCTTTGAACAAAAATGGTTTTGTTATTGAACAGTATTTGATTTCCTGGTTCTCGGTCATTGGACAAGTTGTTGGTCTTAAAATTCCTTTGGAAATGCTGGATACTGTAGTTTCTAATGATTCTTAG 732 0.3948 MDLKDDAVKGIVPWDGTLSSFDFSLSAHTFSDKWKRFNPSFPAWQWITCPKQHHLVASHKVEGYLSLENMCHIKSSQSLQEQESDRSLTWKEESNISQREEPFDKATLVCPEHEVNHYDFHIVYSASYRVPVLYFRSYRSDGQLLPFNEIEKDLPGHSAKLRSESKWTFITHEEHPYLNRPWYKLHPCGTSDWMKLLFHSDSSLNKNGFVIEQYLISWFSVIGQVVGLKIPLEMLDTVVSNDS* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0832 243 Pfam Autophagocytosis associated protein, active-site domain 30 231 IPR007135 GO:0019787
Gso3g0832 243 PANTHER UBIQUITIN-LIKE-CONJUGATING ENZYME ATG3 11 234 IPR007135 GO:0019787
Gso3g0832 243 Gene3D - 64 229 - -
Gso3g0832 243 PANTHER AUTOPHAGY-RELATED 10, ISOFORM B 11 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0832 Gso-Chr3 30305841 30310568 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0832 K17888 - gmx:100808589 504.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g1058 7 14782739 14786177 Gso3g0832 3 30305841 30310568 GST