Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1041 ATGGCTTCTTCTTACTGTTGTTCCCGTTTGTTGTTGCAATCACAGAGTTGGCGACTAATGTTACGATTCTCACCCTTTCTCGCCACTTCCCCTCCTTCTTCTTCCCTTTCTTTCTCCTCCAATTGCCACGTGTCCTCTTCCGCTCAACTAACAACACTTCAACAACAACAACAACAACCCCTTCCGCGAAGCTCACAGCTGGTGGCATTGGAATATGCAGACCTCAACCTCTCTCACAACTTGGATCTGGGTCACGTCAGGATAAGGCAGCATGTTAACCCCCTCAGCTCTTCTCTCTCGGTTCCTGCACAAGTACCAGAATGGAACCATGCCTTTGCAGACCCAACATTGCCACTCATGGTGGACATTGGATGTGGTAACCTGAATCTCAATGATAATTTATTGGATGCATTTTGTGTGTCTGTTAAGGACTGGGACAGATCATGCAGTGGCAGGTTTCTAATGTGGCTTGCTAAAAGAACTCCTAAAGAGAGAAATTTTTTGGGATTGGAAATACGGCAAAAGATAGTGAAGCGTGCTGAGTCATGGGCAAAGGATCTGGCTCTTGATAACGTACATTTTTTGTTTGCAAATGCAACAATTTCTTTCAAGCAGTTGGTAGAATCATATCCCGGGCCCTTGGCCTTAGTTTCAATTTTGTGTCCAGACCCACATTTCAAGAAAAGACATCATAAAAGAAGGGTTCTGCAGAAGCCTTTGGTTGATGCTATAGTAGATAATTTAATGCCTGGGGGACAGGTATTCACACAGTCTGATGTGTTTGAAATGGCACTTGACATGAGAAATCAGTTTGATGAAGTTGAAACACTTAAACACATAGAAGTTTTGAACCCATCTATGTTGTGTGACAGTGAAGGGTGGTTGTTAGGCAACCCCATGGGAATAAGGACTGAGAGAGAGATTCATGCAGAACATGAAGGTGCAAAAATCTATAGAAGATTGTACCAGAAACCTTGTCCATGCCAGACATAA 993 0.435 MASSYCCSRLLLQSQSWRLMLRFSPFLATSPPSSSLSFSSNCHVSSSAQLTTLQQQQQQPLPRSSQLVALEYADLNLSHNLDLGHVRIRQHVNPLSSSLSVPAQVPEWNHAFADPTLPLMVDIGCGNLNLNDNLLDAFCVSVKDWDRSCSGRFLMWLAKRTPKERNFLGLEIRQKIVKRAESWAKDLALDNVHFLFANATISFKQLVESYPGPLALVSILCPDPHFKKRHHKRRVLQKPLVDAIVDNLMPGGQVFTQSDVFEMALDMRNQFDEVETLKHIEVLNPSMLCDSEGWLLGNPMGIRTEREIHAEHEGAKIYRRLYQKPCPCQT* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1041 330 ProSiteProfiles SAM-dependent methyltransferase TRMB-type domain profile. 76 324 IPR003358 GO:0006400|GO:0008176
Gso7g1041 330 PANTHER 3-DEOXY-D-MANNO-OCTULOSONIC-ACID TRANSFERASE/TRNA GUANINE-N 7 - -METHYLTRANSFERASE 35 126 IPR003358 GO:0006400|GO:0008176
Gso7g1041 330 PANTHER 3-DEOXY-D-MANNO-OCTULOSONIC-ACID TRANSFERASE/TRNA GUANINE-N 7 - -METHYLTRANSFERASE 148 324 IPR003358 GO:0006400|GO:0008176
Gso7g1041 330 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 150 323 IPR029063 -
Gso7g1041 330 Pfam Putative methyltransferase 150 319 IPR003358 GO:0006400|GO:0008176
Gso7g1041 330 Gene3D Vaccinia Virus protein VP39 148 325 IPR029063 -
Gso7g1041 330 PANTHER TRNA (GUANINE-N(7)-)-METHYLTRANSFERASE 148 324 - -
Gso7g1041 330 PANTHER TRNA (GUANINE-N(7)-)-METHYLTRANSFERASE 35 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1041 Gso-Chr7 14356528 14361758 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1041 K03439 - gmx:100789050 531.946
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g1041 7 14356528 14361758 Gso7g1041 7 14356528 14361758 ECH
Gso7g1041 7 14356528 14361758 Gso3g0858 3 30823964 30828893 GST