Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0858 ATGGCTTCTTCTTACTGTTGTTCCCGTTTGTTGTTGCAATCACAGAGTTCGCGACTAATGTTACGATTCTCACCTTTTCTCGCTACTCCCCCTACTCCTTCTTCCCTCTCTTTCTCCTCCAACTGCCACGTGTCCTCTTCCGCTCAAGCAACACTACAACAACAACATGAACAACAGCCCCTTCCGCAAAGCTCACAGCTGGTGGCATTGGAATATGCTGACCTCAACCTCTCTTACAACTTGGATCTGGGTCACGTCAGGATAAGGCAGCATGTTAATCCCCTAAGCTCTTCTTTCTCGGTTCCTGCACAAGTACCAGACTGGAACCATGCCTTTGCAGACCCAACATTGCCGCTCATGGTGGACATTGGATGTGGCAGTGGCAGGTTTCTAATGTGGCTGGCTAAAAGAACTCCTAAAGAGAGAAACTTTTTGGGATTGGAAATACGGGAAAGGATAGTCAAGCGTGCTGAGTCATGGGCAAAGGATCTGGCTCTTGATAACATACTTTTCTTGTTTGCAAACGCGACAATTTCTTTCAAGCAGTTGGTAGAATCATATCCCGGGCCCTTGGTCTTAGTTTCAGTATTGTGTCCAGACCCACATTTCAAGAAAAAACATCATAAAAGAAGAGTTCTGCAGAAGCCTTTGGTTGGTGCTATAGTAGATAATTTAATGCCTGGGGGACAGGTATTCATACAGTCTGATGTGATTGAAATGGCACTTGACATGAGAAATCAGTTTGATGAAGTTAAAACACTCAAACACATAGAAGTTTTGGACCCGGCTATGTTGTGTGACAGTGAAGGGTGGTTGTTAAGCAACCCCATGGCAATAAGGACTGAGAGAGAGATTCATGCAGAACATGAAGGTGCAAAAATCTATAGAAGATTGTACCAGAAACAGATGTGA 912 0.4452 MASSYCCSRLLLQSQSSRLMLRFSPFLATPPTPSSLSFSSNCHVSSSAQATLQQQHEQQPLPQSSQLVALEYADLNLSYNLDLGHVRIRQHVNPLSSSFSVPAQVPDWNHAFADPTLPLMVDIGCGSGRFLMWLAKRTPKERNFLGLEIRERIVKRAESWAKDLALDNILFLFANATISFKQLVESYPGPLVLVSVLCPDPHFKKKHHKRRVLQKPLVGAIVDNLMPGGQVFIQSDVIEMALDMRNQFDEVKTLKHIEVLDPAMLCDSEGWLLSNPMAIRTEREIHAEHEGAKIYRRLYQKQM* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0858 303 PANTHER 3-DEOXY-D-MANNO-OCTULOSONIC-ACID TRANSFERASE/TRNA GUANINE-N 7 - -METHYLTRANSFERASE 37 302 IPR003358 GO:0006400|GO:0008176
Gso3g0858 303 CDD AdoMet_MTases 121 234 - -
Gso3g0858 303 TIGRFAM TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 104 300 IPR003358 GO:0006400|GO:0008176
Gso3g0858 303 Pfam Putative methyltransferase 118 296 IPR003358 GO:0006400|GO:0008176
Gso3g0858 303 ProSiteProfiles SAM-dependent methyltransferase TRMB-type domain profile. 76 301 IPR003358 GO:0006400|GO:0008176
Gso3g0858 303 Gene3D Vaccinia Virus protein VP39 88 303 IPR029063 -
Gso3g0858 303 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 118 300 IPR029063 -
Gso3g0858 303 PANTHER TRNA (GUANINE-N(7)-)-METHYLTRANSFERASE 37 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0858 Gso-Chr3 30823964 30828893 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0858 K03439 - gmx:100788255 551.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g1041 7 14356528 14361758 Gso3g0858 3 30823964 30828893 GST