Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1040 ATGTCCACTCTGCTTCACTCCGCATCAACTTCTTCTCCTTCCTTCTCTCAGATCACCACTCCTCGTTTCGCCCCAATCACTCGTATCTCTCTCCGAAACGGCGTCCGGTGCAAGGCGATAGAAGCAGTGAATTTGGAGAATGGAAGGCCGAGCGCGAGCGAGTTCCTAGTCAGCGGAAGCGGAAACGCGATTCCGAGGTACGTCGTGGCGCCCAACACGCGTATTCAGGATTTGGTTAACCGAAACGACACTCGCCTCCGGATATTCTCCGGCACCGCCAATCCGGCGCTCGCTCAGGAAATTGCATGCTACCTGGGCCTGGAGCTAGGAAAAACTAAGATAAAGCGTTTTGCTGATGGTGAGATATATGTCCAGCTGCAAGAGAGTGTCAGGGGGTGTGATGTGTTTCTTGTGCAGCCCACATGTCCTCCTGCAAATGAGAATCTTATGGAGCTTCTCATAATGATTGATGCATGCAGGAGGGCTTCAGCCAAAAATATTACTGCTGTCATTCCGTATTTTGGATATGCCAGAGCTGATAGAAAGACTCAAGGACGTGAATCCATTGCTGCCAAGCTTGTCGCAAATTTAATTACAGAAGCAGGTGCAAATCGTGTACTTGCTTGTGACCTCCATTCTGGGCAGTCCATGGGCTATTTTGATATTCCAGTTGATCATGTGTATGGACAGTCTGTTATACTTGATTACCTTGCCAGCAAGACTATTTGTTCAGATGATTTGGTAGTTGTCTCACCAGATGTTGGTGGTGTTGCCAGAGCACGTGCTTTTGCTAAAAAATTATCTGATGCTCCTTTAGCTATTGTTGATAAAAGGCGCCATGGGCATAATGTTGCTGAGGTGATGAATTTGATTGGTGATGTAAGGGGAAAGGTAGCAGTTATGGTTGATGACATGATTGATACTGCTGGGACTATTGCCAAAGGTGCAGCTCTGTTGCATCAAGAAGGGGCAAGAGAAGTCTATGCATGCACTACACATGCTGTTTTCAGTCCTCCTGCTATTGAGAGATTGTCAAGCGGTTTGTTCCAAGAAGTTATCATAACTAATACAATTCCAGTGACAGAACAGAACTATTTCCCCCAATTAACTGTCCTGTCGGTGGCAAACCTTTTGGGCGAGACTGTTTGGCGTGTTCATGATGATTGCTCACTTATGACACTGTGGTAA 1188 0.4672 MSTLLHSASTSSPSFSQITTPRFAPITRISLRNGVRCKAIEAVNLENGRPSASEFLVSGSGNAIPRYVVAPNTRIQDLVNRNDTRLRIFSGTANPALAQEIACYLGLELGKTKIKRFADGEIYVQLQESVRGCDVFLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRKTQGRESIAAKLVANLITEAGANRVLACDLHSGQSMGYFDIPVDHVYGQSVILDYLASKTICSDDLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRHGHNVAEVMNLIGDVRGKVAVMVDDMIDTAGTIAKGAALLHQEGAREVYACTTHAVFSPPAIERLSSGLFQEVIITNTIPVTEQNYFPQLTVLSVANLLGETVWRVHDDCSLMTLW* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1040 395 Pfam N-terminal domain of ribose phosphate pyrophosphokinase 86 202 IPR029099 -
Gso7g1040 395 SMART Pribosyltran_N_2 86 202 - -
Gso7g1040 395 ProSitePatterns Phosphoribosyl pyrophosphate synthase signature. 210 225 IPR000842 GO:0000287|GO:0004749|GO:0009156|GO:0044249
Gso7g1040 395 Hamap Putative ribose-phosphate pyrophosphokinase [prs]. 86 395 IPR037515 GO:0004749
Gso7g1040 395 PANTHER RIBOSE-PHOSPHATE PYROPHOSPHOKINASE 2, CHLOROPLASTIC 46 392 - -
Gso7g1040 395 PANTHER RIBOSE-PHOSPHATE DIPHOSPHOKINASE FAMILY MEMBER 46 392 IPR005946 GO:0000287|GO:0004749|GO:0009165
Gso7g1040 395 Gene3D - 89 387 IPR029057 -
Gso7g1040 395 SUPERFAMILY PRTase-like 151 387 IPR029057 -
Gso7g1040 395 TIGRFAM ribP_PPkin: ribose-phosphate diphosphokinase 87 394 IPR005946 GO:0000287|GO:0004749|GO:0009165
Gso7g1040 395 Gene3D - 229 372 IPR029057 -
Gso7g1040 395 CDD PRTases_typeI 245 357 IPR000836 -
Gso7g1040 395 Pfam Phosphoribosyl synthetase-associated domain 287 394 IPR005946 GO:0000287|GO:0004749|GO:0009165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1040 Gso-Chr7 14318569 14332577 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1040 K00948 - gmx:100789585 765.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g1040 7 14318569 14332577 Gso3g0860 3 30843997 30853358 GST