Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0860 ATGTCCACTCTGCTTCACTCCGCTCCCACTTCTTCTCCTTCCTTCTCTCGGATCATCACTCCTCGTTTCGCTTTCGCTCCAATCACTCGCATCTCTCTCCGAAACGGCGTCCGTAGCAAGGCGATCGAAGCAGTGAAGTTGGAGAATGGAAGGCCGAGCGCGAGCGAGTTCGTAGTCAGCGGAAGCGGAAACGCAATTCCGAGTTACGTCGTGGCGCCAAACGCGCGTGTTCAGGATTTGGTTAACCGAAACGACACTCGCCTCCGGATATTCTCCGGCACTGCCAATCCGGCTCTTGCTCAGGAAATTGCATGCTACCTGGGCCTGGAGCTAGGAAAAATTAAGATAAAGCGTTTTGCTGATGGTGAGATATATGTCCAGCTGCAAGAGAGTGTCAGGGGGTGTGATGTGTTTCTTGTGCAGCCCACATGTCCTCCTGCAAATGAGAATCTTATGGAGCTTCTCATAATGATTGATGCCTGCAGGAGGGCTTCAGCCAAAAATATTACTGCTGTCATTCCATATTTTGGATATGCCAGAGCTGATAGAAAGACCCAAGGACGTGAATCCATTGCTGCCAAGCTTGTAGCAAATTTAATTACAGAAGCAGGTGCAAATCGTGTACTTGCTTGTGACCTCCATTCTGGGCAGTCCATGGGCTATTTTGATATTCCAGTTGATCATGTGTATGGCCAGCCTGTTATACTTGATTACCTTGCCAGCAAGACTATTTGTTCAGATGATTTGGTAGTTGTCTCGCCAGATGTTGGTGGTGTTGCCAGAGCACGTGCTTTTGCCAAAAAATTATCTGATGCTCCTTTAGCTATTGTTGATAAAAGGCGCCATGGGCATAATGTTGCTGAGGTGATGAATTTGATTGGTGATGTAAGGGGAAAGGTAGCAGTTATGGTTGATGACATGATTGATACTGCTGGGACTATTGCCAAAGGTGCAGCTCTGTTGCATCAAGAAGGGGCAAGAGAAGTCTATGCATGCACTACACATGCTGTTTTCAGTCCTCCTGCTATTGAGAGGTTGTCAAGTGGTTTGTTCCAAGAAGTTATCATAACTAATACAATTCCAGTGGCAGAACAGAACTATTTCCCTCAATTAACTGTCTTGTCGGTGGCAAACCTTCTGGGCGAGACTGTTTGGCGTGTTCATGATGATTGCTCAAAACCCAACTCGTGCAAGCTTTTTAAATGGGTAGATGAAGATGTAAAGGAGGATGAGGATGTAGAAGAGGAAGAGAAATGTAGGGATGAGACTCAGAAGCAACTTGAAGAGGCAAGAAAAGAAAATCATAAACTACATAAGAAGCTTGATGTTAAGAGAAGAAAAAGATCGATTCTGCTTTGTGTCGTAGGACTGTGTTTGGTAATCACATTATTCTCCTGTGTTGTGCGCGTGTGGAACTAA 1419 0.4567 MSTLLHSAPTSSPSFSRIITPRFAFAPITRISLRNGVRSKAIEAVKLENGRPSASEFVVSGSGNAIPSYVVAPNARVQDLVNRNDTRLRIFSGTANPALAQEIACYLGLELGKIKIKRFADGEIYVQLQESVRGCDVFLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRKTQGRESIAAKLVANLITEAGANRVLACDLHSGQSMGYFDIPVDHVYGQPVILDYLASKTICSDDLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRHGHNVAEVMNLIGDVRGKVAVMVDDMIDTAGTIAKGAALLHQEGAREVYACTTHAVFSPPAIERLSSGLFQEVIITNTIPVAEQNYFPQLTVLSVANLLGETVWRVHDDCSKPNSCKLFKWVDEDVKEDEDVEEEEKCRDETQKQLEEARKENHKLHKKLDVKRRKRSILLCVVGLCLVITLFSCVVRVWN* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0860 472 Gene3D - 91 389 IPR029057 -
Gso3g0860 472 Pfam N-terminal domain of ribose phosphate pyrophosphokinase 88 204 IPR029099 -
Gso3g0860 472 Coils Coil 413 447 - -
Gso3g0860 472 SUPERFAMILY PRTase-like 153 389 IPR029057 -
Gso3g0860 472 SMART Pribosyltran_N_2 88 204 - -
Gso3g0860 472 CDD PRTases_typeI 247 359 IPR000836 -
Gso3g0860 472 Hamap Putative ribose-phosphate pyrophosphokinase [prs]. 88 398 IPR037515 GO:0004749
Gso3g0860 472 TIGRFAM ribP_PPkin: ribose-phosphate diphosphokinase 89 392 IPR005946 GO:0000287|GO:0004749|GO:0009165
Gso3g0860 472 Gene3D - 231 374 IPR029057 -
Gso3g0860 472 Pfam Phosphoribosyl synthetase-associated domain 289 392 IPR005946 GO:0000287|GO:0004749|GO:0009165
Gso3g0860 472 PANTHER RIBOSE-PHOSPHATE DIPHOSPHOKINASE FAMILY MEMBER 48 392 IPR005946 GO:0000287|GO:0004749|GO:0009165
Gso3g0860 472 PANTHER RIBOSE-PHOSPHATE PYROPHOSPHOKINASE 2, CHLOROPLASTIC 48 392 - -
Gso3g0860 472 ProSitePatterns Phosphoribosyl pyrophosphate synthase signature. 212 227 IPR000842 GO:0000287|GO:0004749|GO:0009156|GO:0044249
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0860 Gso-Chr3 30843997 30853358 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0860 K00948 - gmx:100816430 764.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g1040 7 14318569 14332577 Gso3g0860 3 30843997 30853358 GST