Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0924 ATGACACTTCTTCATTCCTTGCCCACCATGGCCAACTTCTCTTCCAACCAGATTCGCTTTCTCCTCAGCACCTTGAACGAAGTCAACTTTGACTCCATTTTCCATCAACTCTCTCAGTTTGCGGAATTTGGAACTACTGGGTGCATTTTGCTGCTTCAAACTTGCTTGGATCACTATGGCTATGCCAGAAGAGATATGAAAGACATCCAGCATGAGCCAATTCTTGGGGCAGTCATTAAGTACCTCTTGGACAAACCAAACTTCAGCACAGTGTTTTCTGAGTCGATGAAGAATATAGAAATTAATGAAAGTTTTTTAGAAAGTTTTTGCAATGGATTGCCGTTATCTTTATTGGAAAAAATTATCATCAGTCTTGCTTTATCTGATTCTGAGAATCCCGATGTCAGGCTGTGTGGCAAATTTTTTTGCATGGCTCGGATTGAGGAATTGTGTGCCAACCCTGGTTCTCTGAGTTTCCATGAGCAAATGCACAATGTTATCATGTTCCTAAAGCAGTCTGAGGGTTTTTCCAAGCATGTGGATTCCTTTATGCAGATATTGTCACTTGTGCAGTTCAAAGACACGCCACCTTTTGTCTTGACTCCATTGCTTCCTGATGAGATGCATGAGGCTGATTTTTTAAGGAATATGGAGTTGTTCCATGACAGTGGAGAAAATGATTTTGATGCTATTTTGGCAGACATACAGAAGGAAATGAACATGGGTGATATCGTGAAGGAACTAGGCTATGGATGCACGGTTGATGTCTCACAGTGCAAGGAAATATTTTCACTCTTTTTACCTTTAACTGAAAATACACTCTCTAAATTACTTGGTGCAATTGCTTGCACCCGTACTGGGCTGGAGGACAGCCAAAACACATACTTAACTTTTCGTGCAGCCCATGGATACAATGTGTCTGAGTTGCCACCACTGAACTCTTGGAATATTGATGTCTTGATTGATACACTTATGCATCTTGCACCTCATACTAATTGGGTACGCGTTATTGAAAGCCTTGATCATGAAGGGTTTTTTCTTCCTAGTGAAGAAGCGTTCTCTTTTCTCATGTCTGTATATAAACATGCCTGTAAGGAACCATTTCCTCTCCATGCCATCTGTGGGTCCATCTGGAAGAATACTGAGGGTCAGCTGTCTTTCCTTAAATATGCTGTATCAGCACCACCGGAAATTTTTACCTTTGCACACTCGGGAAGGCAGCTGGCATATGTTGATGCAATTAATGGCCACAAGCTTCAAAATGGACATGCAAATCATGCATGGCTGTGTCTTGATCTTTTAGATGTCCTCTGCCAGCTAGCTGAGAAGGGTCATGCCAGTATTGTTCGATTAATCTTTGATTATCCCCTTAAACACTGTCCTGAAGTCTTGCTTCTTGGGCTGGCACATATTAATACTGCCTACAACCTCTTGCAGCAGGAAGTATCTCTGATTGTTTTTCCCATGATTTTAAAAAGTGCTGTAGGCAGTGGGATGATTCTTCACCTTTGGCATGTTAATCCCAATCTGGTATTGAGAGGGTTTATTGATTCTCAAAACAATGATGCAGGCAGTATTGTAAGAATTGTTGAAATCTGCCAGGAGCTAAAGATTCTATCATCTGTGGTGGAAATTATTCCCTATTATTATAGTATAAGGTTAGCAGCTGTTGCATCAAGAAAAGAATTTCTTGACCTTGAGAAGTGGTTGAGTAGCAACTTAACTACATACAAGGAAGCCTTTTTTGAGGAGTGCCTCAAGTTCTTAAAGGATACCCATTTTGGTGGATCGCAGAACCTTTCTGGCAAATCATTTCATCAGTCTGGTGCTGTTCTGAGTCTATATGCCGAGGCAACTGCTACCATCTTGAAGGTTCTTAAATCTCATACTGACTTGGTTGCTTCTAGACAACTTTCTGAGGAGTTGGAGAGGCTTCATATATCTATGATAGATACAAATCCAAGGCTTCAGAATGGTGGGACAGCTGATTCATCTACTTCTGATGGATATGCGGATGACATTGAAGCTGAAGCAAACTCTTACTTCCATCAAATGTTTTCTGATCAGTTAACCATTAATGCAATGGTACAGATGCTTACACGATTCAAGGAATCTTCAGTGAAGAGGGAGAAATCAATTTTTGAATGCATGATTGCAAACTTGTTTGAGGAGTATAGATTTTTCCCAAAGTATCCTGAAAGACAACTCAAAATTGCTGCAGTTCTCTTTGGTTCTGTGATCAAGCATCAGCTTGTAACTCATCTATCTTTGGGGATTGCTCTTCGTTATGTTCTTGATGCATTGCGCAAGCCTGCAGATTCTAAAATGTTTTTGTTTGGAAGTCTGGCATTGGAGCAGTTTGTGGATCGTCTTATTGAGTGGCCTCAGTATTGCAATCATATTCTTCAAATTTCCCATTTGCGCAGTACACATTCAGAAATAGTTGCTTTCATTGAGCAGGCTCTTGCCAGGATTTCCTCTGGTCATTCAGATGTTGATGGGGCGAGTCATGCTTCTGTTATTAGTAACCATCATTCTGCACAGGCTTCATTAGGGCATGTAGAGCTCAGTGGCTCTAGCGTCATACAACCTGGGCAACAACATTTGTCAATGCAGCTTCAACAACGACGTGAAAATCCGTTGGATGATCGTCTCAAAGCTTCTGTTGGTTCATCTACGGATGTAAAACCATTGTTATCTTCTCTAGGGCAATCTTCAGTACTAACACCTACTGATGCTTCTAGTACCAATAAGTTACATAGCACAGTCAGCACGTCATCAATGCTATCTTCGTCTTCTCCTGGTTTTGTTCGTCCTTCCCGTGGAACTACTTCTGCCAGGTTTGGATCTGCCTTGAACATTGAAACTTTGGTTGCTGCTGCTGAGAAAAGAGAAATTCCTATTGAGGCTCCAGGGTCAGAGGTTCAGGACAAGATATTATTTATAATTAATAATGTTTCTGCTGCTAATATTGAAGCTAAAGCAAAAGAGTTCACTGAAATTTTGAAAGAGCAGTACTATCCTTGGTTTGCACAGTATATGGTTATGAAAAGAGCGAGCATTGAGCCAAATTTCCATGACTTGTACCTGAAATTCCTGGATAAAGTTAATTCAAAGGCTTTGAACAAAGAGATTGTCCAGGCAACTTATGAAAATTGCAAGGTTCTTTTAGGATCTGAGCTCATAAAATCAAGTTCAGAGGAACGTTCTTTGCTTAAAAATTTGGGGAGCTGGCTTGGAAAGTTAACAATTGGCCGGAATCAGGTTTTGAGAGCTCGTGAAATAGACCCAAAGTCTTTGATTATGGAGGCATATGAGAAGGGGCTAATGATTGCTGTTATTCCATTTACGTCAAAGGTCCTTGAACCATGCCAAAGCAGTCTTGCATATCAACCTCCTAATCCTTGGACTATGGGCATTTTGGGATTGCTTGCTGAGATTTATTCAATGCCAAACTTGAAAATGAACCTCAAATTTGACATAGAGGTTTTATTCAAAAATCTGTGTGTTGATATGAAGGATGTCACACCAACTTCTCTCCTGAAGGATAGAAAAAGAGAAATTGAAGGAAATCCTGATTTCTCTAATAAAGATGTTGGGGCATCTCAATCACAAATAATTACTGATATAAAATCTGGCCTTGTACCTCCGGTAAATCAAGTGGAATTACCACTTGAAGTCACCAATCCATCCAACACAGGGGCTCATCCACATATACTGTCTCAGTATGGTGGTCCTCTTCATATTTCCTCGGGAGCATTGATGGAAGATGAAAAGGTTACACCTCTGGGATTGTCTGATCAACTTCCCTCTGCTCAAGGACTGTTACAAGCAAATCCTGCCCCAGCACCTTTTTCTATTAGCCAGCTTCCAACACAGATACCTAATATTGGGACTCACGTTATTATCAATCAAAAGCTCAGTGGTTTTGGGCTGCAAATGCATTTTCAGAGAGCGGTACCCATTGCAATGGACAGAGCTATCAAAGAGATAGTGTCTAGTATTGTGCAGCGTAGTGTTTCCATAGCAACACAAACAACCAAGGAGCTTGTTTTAAAGGACTATGCCATGGAATCTGATGAGACACGCATATTAAATGCGGCACACTTGATGGTTGCTAGTCTGGCTGGAAGTTTGGCTCATGTTACGTGCAAAGAACCATTACGGGCATCAATATCTGGTCAACTGAGGACTTCACTTCAGAACTTAAATATTGCTAATGAAATTTTGGAACAAGCTGTGCAACTTGTCACCAATGATAATCTTGATCTAGGCTGTGCAGTCATTGAACAGGCTGCTACTGACAAGGCAATAAACACCATCGATACAGAGATTGGTCAACAACTCTCTTTGAGAAGGAAGCATCGAGAAGGTATGGGTTCTACATTTTTTGATGCAAATTTGTATCCACAAGGTTCTATGGGTGGTGTTCCAGAGCCTCTTCGCCCCAAGCCTGGTCAGTTGTCTCTCTCACAACAACGTGTCTATGAGGACTTCGTTCGGCTTCCCTGGCAAAACCAGTCTAGCCAGAGCTCACATTCTATGTCTGCTGGTGTCGCTGTTCAATCTGGCAATACTGGTCTTACTGGCACTAATGGTTCTGTATCAGGGCAGATTAACCCTGGATACCCTGTGACCACAGGGTATGAAGGAGTATCTAGACCATTAGATGATATGACAGAATCTAATTTGGCTCCACATTTTAGTGCTTCCTCGATTAACATTAGAGCAGCTGATAGTGTTTCCCAGCACAGTATGGAGAAAGACTCTGTTGCCTCATTTCCTTCGGCTGCTTCCACCCCTGAATTGCATGCAGTGGATTCTTCTGAAGTGAAAGAATCTGGAACTTCTCCACAGCCACTAGTTACATCAGGTGCTGTGGAGCGCCTTGGAAGTAGTTTTTTGGAGCCTTCTCTCACAACAAGAGATGCCCTAGATAAATTCCAAATTGTTGCGCAAAAGTTGGAAGCTATGGTCAGCAATGATTCCAGGGATGGAGAAATACAGGGTGTCATTTCTGAGGTTCCTGAGATCATACTTAGATGTGTTAGTCGAGATGAGGCAGCTTTAGCTGTGGCTCAAAAGGTTTTCAGGGGTTTGTATGATAATGCATCAAACAATATTCATGTCTCTGCTCATCTTGCTATCCTGACTGCCATTCGTGATGTTTGCAAGCTTGCTGTCAAGGAGCTTACTAGTTGGGTAATTTACTCGGAAGAAGAAAGGAAATATAACAAAGAAATTACTGTTGGCCTCATCCGTAGTGAATTGCTAAATCTTACTGAGTACAATGTTCATATGGCCAAACTTATTGATGGAGGAAGGAACAAGGCTGCAACCGAATTTTCCATTTCCCTTCTTCAAACCCTGGTTGTCGAGGAACCTAAAGTTATTTCAGAACTTCACAATCTTGTTGATGCTTTGGCAAAGCTTGCTACAAAGCCTGGATGCCCTGAGTCATTACCACAGCTTCTTGACATGATCAAGAATCCTGGTGCTCTATCTTCTAGTAATGCTGGAAAGGAGGATAAGGCAAGACAATCAAGAGACAATAAGGGTTCTGGTCTGTTACCTGCAAACAGGGAAGAGTTCAACAGCGTCGATTCTATTGAACCAGATCCTGCTGGGTTCCGGGAGCAGGTTTCCATGTTGTTTACAGAATGGTATAGGATATGTGAACTTCCTGGTGGCTATGATACAGCTTCTACCCACTTTACATTACAATTGCATCAGAATGGGCTGCTTAAGGGGGATGATCTTACAGATCGCTTTTTCCGACTATTGATGGAACTAGCTGTTGCACATTGCTTATCCACTGAGATGATTAATTCTGGGTCACTACAGTCTCAACCGCTGCAGACAATGTCATTTCTTGCAATTGATATTTATGCAAAGCTTGTCTTCTCAATCTTGAAGGGATCAAACAAACTCTTTCTTCTTTCCAAGATTCTGGCAGTTACTGTCAGATTCATTATAAAAGATGCAGAGGAGAAGAAGGCCTCTTTTAATCCAAGGCCACTTTTCAGATTATTCATCAACTGGCTTCTAGATCTTGGTTCACTTGAGCCTGTTACTGATGGTGCAAATCTTCAGATTTTAACTGCTTTTGCCAATGCATTTCATGCTTTGCAGCCCCTCAAAGTTCCTGCATTCAGTTTTGCATGGCTTGAGTTGATTAGTCACAGGAGCTTCATGCCTAAAATGTTGACTGGTAATGGTCAAAAAGGTTGGCCTTATATCCAAAGGTTGCTTGTAGATCTGTTCCAATTTATGGAGCCTTTTCTGAGGCATGCTGAACTTGGAGAACCGGTTCGTGTCCTCTATAAAGGAACACTTAGGGTGCTCTTAGTGCTACTTCATGACTTCCCTGAGTTTCTATGTGACTATCACTTTACCTTTTGTGATGTTATTCCTCCAAGTTGCATACAGATGAGGAATATCATTCTAAGTGCATTTCCACGTAGTATGAGGCTGCCAGATCCATCTACTCCTAATCTGAAGATTGATTTGCTTCAAGAAATAACCCAATCGCCTCGCATTCTTTCGGAGGTTGATGCAGCACTCAAAGCAAAGCAGATGAAGGTTGATGTAGATGAATACCTTAAGACAAGGCAACAGAGTTCGCCGTTTTTATCTGAACTGAAGGATAAGCTGCTTCTCTCACCCAATGAAGCAGCTTCTGCTGGGACTCGATATAATGTGCCGTTAATTAACTCACTTGTGCTATATGTTGGAATGCAGGCAATCCATCAGCTTCAGGGACGAACTCCCCATACTCAAACATCAGCAAATGCTTTCCCCTTAGCCGTATTTTCTGTTGGTGCTGCATTGGATATTTTCCAGACCCTAATTGTGGACTTGGATACTGAAGGGCGCTACCTTTTCCTAAATGCTATTGCCAACCAACTGCGTTATCCTAATACTAATACACACTACTTTTCCTTCATCCTTCTGTACTTGTTTGCTGAATCAAACCAGGAAGTTATCCAAGAACAAATTACTAGAGTCTTGTTAGAACGCCTAATTGTTAACCGTCCTCATCCCTGGGGTCTCCTCATTACTTTTATTGAGCTGATCAAGAATCCTAGGTACAATTTCTGGAACCGGAGTTTCATAAGATGTGCACCGGAGATTGAAAAACTTTTTGAATCAGTGTCAAGATCTTGTGGAGGTCCAAAACCAGTGGATGATAGCATGGTTTCGGGTTGGGTCTGA 7215 0.4159 MTLLHSLPTMANFSSNQIRFLLSTLNEVNFDSIFHQLSQFAEFGTTGCILLLQTCLDHYGYARRDMKDIQHEPILGAVIKYLLDKPNFSTVFSESMKNIEINESFLESFCNGLPLSLLEKIIISLALSDSENPDVRLCGKFFCMARIEELCANPGSLSFHEQMHNVIMFLKQSEGFSKHVDSFMQILSLVQFKDTPPFVLTPLLPDEMHEADFLRNMELFHDSGENDFDAILADIQKEMNMGDIVKELGYGCTVDVSQCKEIFSLFLPLTENTLSKLLGAIACTRTGLEDSQNTYLTFRAAHGYNVSELPPLNSWNIDVLIDTLMHLAPHTNWVRVIESLDHEGFFLPSEEAFSFLMSVYKHACKEPFPLHAICGSIWKNTEGQLSFLKYAVSAPPEIFTFAHSGRQLAYVDAINGHKLQNGHANHAWLCLDLLDVLCQLAEKGHASIVRLIFDYPLKHCPEVLLLGLAHINTAYNLLQQEVSLIVFPMILKSAVGSGMILHLWHVNPNLVLRGFIDSQNNDAGSIVRIVEICQELKILSSVVEIIPYYYSIRLAAVASRKEFLDLEKWLSSNLTTYKEAFFEECLKFLKDTHFGGSQNLSGKSFHQSGAVLSLYAEATATILKVLKSHTDLVASRQLSEELERLHISMIDTNPRLQNGGTADSSTSDGYADDIEAEANSYFHQMFSDQLTINAMVQMLTRFKESSVKREKSIFECMIANLFEEYRFFPKYPERQLKIAAVLFGSVIKHQLVTHLSLGIALRYVLDALRKPADSKMFLFGSLALEQFVDRLIEWPQYCNHILQISHLRSTHSEIVAFIEQALARISSGHSDVDGASHASVISNHHSAQASLGHVELSGSSVIQPGQQHLSMQLQQRRENPLDDRLKASVGSSTDVKPLLSSLGQSSVLTPTDASSTNKLHSTVSTSSMLSSSSPGFVRPSRGTTSARFGSALNIETLVAAAEKREIPIEAPGSEVQDKILFIINNVSAANIEAKAKEFTEILKEQYYPWFAQYMVMKRASIEPNFHDLYLKFLDKVNSKALNKEIVQATYENCKVLLGSELIKSSSEERSLLKNLGSWLGKLTIGRNQVLRAREIDPKSLIMEAYEKGLMIAVIPFTSKVLEPCQSSLAYQPPNPWTMGILGLLAEIYSMPNLKMNLKFDIEVLFKNLCVDMKDVTPTSLLKDRKREIEGNPDFSNKDVGASQSQIITDIKSGLVPPVNQVELPLEVTNPSNTGAHPHILSQYGGPLHISSGALMEDEKVTPLGLSDQLPSAQGLLQANPAPAPFSISQLPTQIPNIGTHVIINQKLSGFGLQMHFQRAVPIAMDRAIKEIVSSIVQRSVSIATQTTKELVLKDYAMESDETRILNAAHLMVASLAGSLAHVTCKEPLRASISGQLRTSLQNLNIANEILEQAVQLVTNDNLDLGCAVIEQAATDKAINTIDTEIGQQLSLRRKHREGMGSTFFDANLYPQGSMGGVPEPLRPKPGQLSLSQQRVYEDFVRLPWQNQSSQSSHSMSAGVAVQSGNTGLTGTNGSVSGQINPGYPVTTGYEGVSRPLDDMTESNLAPHFSASSINIRAADSVSQHSMEKDSVASFPSAASTPELHAVDSSEVKESGTSPQPLVTSGAVERLGSSFLEPSLTTRDALDKFQIVAQKLEAMVSNDSRDGEIQGVISEVPEIILRCVSRDEAALAVAQKVFRGLYDNASNNIHVSAHLAILTAIRDVCKLAVKELTSWVIYSEEERKYNKEITVGLIRSELLNLTEYNVHMAKLIDGGRNKAATEFSISLLQTLVVEEPKVISELHNLVDALAKLATKPGCPESLPQLLDMIKNPGALSSSNAGKEDKARQSRDNKGSGLLPANREEFNSVDSIEPDPAGFREQVSMLFTEWYRICELPGGYDTASTHFTLQLHQNGLLKGDDLTDRFFRLLMELAVAHCLSTEMINSGSLQSQPLQTMSFLAIDIYAKLVFSILKGSNKLFLLSKILAVTVRFIIKDAEEKKASFNPRPLFRLFINWLLDLGSLEPVTDGANLQILTAFANAFHALQPLKVPAFSFAWLELISHRSFMPKMLTGNGQKGWPYIQRLLVDLFQFMEPFLRHAELGEPVRVLYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIILSAFPRSMRLPDPSTPNLKIDLLQEITQSPRILSEVDAALKAKQMKVDVDEYLKTRQQSSPFLSELKDKLLLSPNEAASAGTRYNVPLINSLVLYVGMQAIHQLQGRTPHTQTSANAFPLAVFSVGAALDIFQTLIVDLDTEGRYLFLNAIANQLRYPNTNTHYFSFILLYLFAESNQEVIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPRYNFWNRSFIRCAPEIEKLFESVSRSCGGPKPVDDSMVSGWV* 2405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0924 2404 Gene3D - 2159 2390 - -
Gso7g0924 2404 MobiDBLite consensus disorder prediction 1580 1623 - -
Gso7g0924 2404 MobiDBLite consensus disorder prediction 1832 1862 - -
Gso7g0924 2404 Gene3D - 1866 2158 - -
Gso7g0924 2404 Pfam CCR4-Not complex component, Not1 2016 2385 IPR007196 -
Gso7g0924 2404 Pfam CCR4-NOT transcription complex subunit 1 CAF1-binding domain 968 1188 IPR032191 -
Gso7g0924 2404 Pfam CCR4-Not complex, Not1 subunit, domain of unknown function DUF3819 1314 1456 IPR024557 -
Gso7g0924 2404 Coils Coil 1400 1420 - -
Gso7g0924 2404 Pfam CCR4-NOT transcription complex subunit 1 HEAT repeat 481 627 IPR032194 -
Gso7g0924 2404 PANTHER BNACNNG58980D PROTEIN 16 2403 - -
Gso7g0924 2404 MobiDBLite consensus disorder prediction 1580 1597 - -
Gso7g0924 2404 Gene3D - 660 827 IPR038535 -
Gso7g0924 2404 Pfam CCR4-NOT transcription complex subunit 1 TTP binding domain 655 824 IPR032193 -
Gso7g0924 2404 Gene3D - 940 1190 - -
Gso7g0924 2404 MobiDBLite consensus disorder prediction 906 942 - -
Gso7g0924 2404 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX 16 2403 IPR040398 GO:0017148|GO:0030015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0924 Gso-Chr7 10773352 10793490 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0924 K12604 - gmx:100783935 4678.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0924 7 10773352 10793490 Gso7g0924 7 10773352 10793490 ECH
Gso7g0924 7 10773352 10793490 Gso3g1017 3 34771387 34774907 GST