Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0919 ATGGAGCCTTCACTCCTACTTTCTTCACCTTCATCATCCACCCCTTTACCTTTCTTCATCTCAAACACACTTCTTTGCCATCCAAAACCCAAACTTTCTACCAAACTCAATTGCACCCTACAAAAGTCCCAAGTTTGGGGCACAAATTTGAGTTGGGTCCCATCACAATCACATCATGGAAGACCTAAATTGGATGCAGTGAGGCCCATAATAACAGCAGCGGTGAAGAGAAGGAAAGAGATTCCCTTCGACAACGTCATCCAGAGGGACAAGAAGCTCAAATTTGTGGTCAAGGTAAGGAACATTCTAGTGACTCAACCAGATAGGGTTATGTCACTTAAGACCCTTGGTAAGTTCAAAAGAGATTTGGGTCTTGATAAAAAGAGGAGACTTATTGCCGTGTTGAAGAAATTCCCAGCAGTGTTTCAGATTATGGAAGAAGGGGTTTACTCCCTCAAATTCAAAATGACCCCTGAAGCCGAAAGGCTCTATTTTGAGGAAATGAGGGTTAGGAATGAGATGGAAGAGTTGGTGGTTGTGAAGCTTAGGAAGTTGTTGATGATGTCACTCGAAAAACGGATTTTGTTGGAGAAAATTGCACATCTCAAGACCGATTTCGGTCTCCCACCAGAGTTTCGAGACACCGTTTGTCATAGGTATCCTCAGTACTTCAAAGTGGTTGCAACTCAGCGTGGTCCTACTTTGGAGTTAACTCATTGGGACCCTGAGCTTGCAGTTTCGGCGGCTGAGCTAGCGGCAGAGGAGAATCGCATTAGGGAAGTGGAGGAGCAGAATTTGATCATAGACAGGCCTCCCAAGTTCAATAGGGTGAAGCTTCCCAAGGGTCTTAATCTTTCCAAGGGGGAGATGAGGAAGATTATGCAGTTCAGAGACTTGCCTTATATTTCGCCTTACTCGGATTTCTCAGGACTTAGGCCTGGGTCTAGGGAGAAGGAGAAGCATGCTTGTGGAGTTGTTCATGAGATTCTGAGCCTCACACTTGAGAAGCGAACGCTGGTTGATCACCTTACGCATTTTCGAGAGGAGTTCAGATTCTCTCAGCAGCTGAGGGGGATGCTGATAAGGCATCCTGATATGTTTTATGTCTCTCTTAAAGGAGATAGGGATTCTGTGTTTCTGAGGGAAGGCTACCAAGATTCTCAGTTGGTGGAGAAGGACCGGTTGTTGCTTATAAAGGAAAAGCTTCGTACTCTGGTTAATGTTCCACGGTTTCCCAAGGGACCTGCTCGCAGGATAGTTGAAGATAGCATGAGAGGAAGTGATAGCAGAGAAGATGAAAGTGGTGAAGAGGAAGAAGAATGGTTAGAAGATGTTGATAATTTAATGAATGATGATGGGTTTGATGACATTGATGATGGTGATGACTGGAGTGATGAAGAAGATGATGATTTGCCGCCAGATTTTGATGAGGATGCTGAACTTTTGGAGTTGGGGCAAGGAAAGACTATTAAACAAGACTCGAGACAGAATGATGAAATGGTCCTTCTTCCTGTACTCCCTGATGGTCGTCCAAGAGAACAATGGTGA 1548 0.4464 MEPSLLLSSPSSSTPLPFFISNTLLCHPKPKLSTKLNCTLQKSQVWGTNLSWVPSQSHHGRPKLDAVRPIITAAVKRRKEIPFDNVIQRDKKLKFVVKVRNILVTQPDRVMSLKTLGKFKRDLGLDKKRRLIAVLKKFPAVFQIMEEGVYSLKFKMTPEAERLYFEEMRVRNEMEELVVVKLRKLLMMSLEKRILLEKIAHLKTDFGLPPEFRDTVCHRYPQYFKVVATQRGPTLELTHWDPELAVSAAELAAEENRIREVEEQNLIIDRPPKFNRVKLPKGLNLSKGEMRKIMQFRDLPYISPYSDFSGLRPGSREKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSLKGDRDSVFLREGYQDSQLVEKDRLLLIKEKLRTLVNVPRFPKGPARRIVEDSMRGSDSREDESGEEEEEWLEDVDNLMNDDGFDDIDDGDDWSDEEDDDLPPDFDEDAELLELGQGKTIKQDSRQNDEMVLLPVLPDGRPREQW* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0919 515 Coils Coil 244 264 - -
Gso7g0919 515 MobiDBLite consensus disorder prediction 432 480 - -
Gso7g0919 515 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 15 468 IPR045040 GO:0003723
Gso7g0919 515 MobiDBLite consensus disorder prediction 417 515 - -
Gso7g0919 515 Pfam Plant organelle RNA recognition domain 80 407 IPR021099 GO:0003723
Gso7g0919 515 MobiDBLite consensus disorder prediction 417 431 - -
Gso7g0919 515 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 15 468 IPR040293 GO:0000373|GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0919 Gso-Chr7 10712227 10714208 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0919 - - gmx:100815794 888.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0919 7 10712227 10714208 Gso3g0027 3 254475 256419 GST