Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0027 ATGGAGCCTTCACTCCTACTTTCTTCACCTTCATCATCCACCCCTTTACCCTTCTTCCTCTCAAACACACTTCCTTTCCATTCAAAACCCAAACTTTCCACCAAGTTCAATTGCACCCTCCAAAAGTCCCATTTTTGGGGCTCAAATTTGAGTTGGGTCCCATCACAATCACACCATGGAAGACCAAAATTGGATGCAGTGAGGCCAATAATAACAGCAGCGGTGAAGAGAAGGAAAGAGCTTCCCTTTGACAACGTTATCCAGAGGGACAAGAAGCTCAAATTCGTGCTCAAGGTAAGGAACATTCTAGTGACTCAACCAGATAGGGTTATGTCTCTTAAGACCCTTGGTAAGTTCAAAAGGGATTTGGGTCTTGACAAAAAGAGGAGACTTATTGCCGTGTTGAAGAAATTCCCAGCAGTGTTTCAGATTATGGAAGAAGGGGTTTTCTCCCTGAAATTCAAAATGACCCCTGAAGCCGAAAGGCTCTATTTTGAGGAAACGAGGGTTAGGAATGAGATGGAAGAGTTGGTGGTTGTGAAGCTTAGGAAGTTGTTGATGATGTCACTAGAAAAACGGATTTTGTTGGAGAAAATTGCACATCTCAAGACAGATTTAGGTCTCCCGCAAGAGTTTCGTGACACCGTTTGTCATAGGTATCCTCAGTACTTCAAAGTGGTTGCAACTCAGCGTGGTCCTGCTTTGGAGTTGACTCATTGGGACCCTGAGCTTGCGGTTTCAGCGGCTGAGCTAGCAGCGGAGGAGAACCGCATTAGGGAAATGGAGGAGCAGAATTTGATCATAGACAGGCCTCCCAAGTTCAATAGGGTGAAGCTTCCCAAGGGTCTTAATCTTTCCAAGGGTGAGATGAGGAAGATTATGCAATTCAGAGACTTGCCTTATTTTTCGCCTTACTCGGATTTCTCAGGGCTGAGGCCGGGGTCACGGGAGAAGGAGAAGCATGCTTGCGGAGTTGTTCACGAGATTTTGAGTCTCACGCTTGAGAAGCGAACACTGGTTGATCACTTTACGCATTTTCGAGAGGAGTTCAGATTCTCTCAGCAGCTGAGGGGGATGCTGATAAGGCATCCTGATATGTTTTATGTCTCTCTTAAAGGAGATAGGGATTCTGTGTTTCTGAGAGAAGGTTATCGGGATTCTCAGTTGGTGGAGAAGGATCGATTGTTGCTTATAAAGGAAAAGCTTCGCACCCTGGTTAATGTTCCACGGTTTCCCAAGGGACCTGCACGCAGGATAGTTGAAGATAGCATGAGAGAAAGCGATGGCAGAGAAGATGAAAGTGGCCAAGAGGAAGAAGAATGGTCAGAAGATGTTGATAATTTATTGAGTGATGATGACTGGAGTGATGAAGATGATGATGATTTGCCGCCAGATTTTGATGAGGATGGTGAACTATTGGAAATTGGACAAGGAAAGACTATTAAACAAGACTCAAGACAGAATGATGAAATGGTCCTTCTTCCTGTATTTGCAGATGGTCGTCCTAGAGAACAATGGTGA 1521 0.4484 MEPSLLLSSPSSSTPLPFFLSNTLPFHSKPKLSTKFNCTLQKSHFWGSNLSWVPSQSHHGRPKLDAVRPIITAAVKRRKELPFDNVIQRDKKLKFVLKVRNILVTQPDRVMSLKTLGKFKRDLGLDKKRRLIAVLKKFPAVFQIMEEGVFSLKFKMTPEAERLYFEETRVRNEMEELVVVKLRKLLMMSLEKRILLEKIAHLKTDLGLPQEFRDTVCHRYPQYFKVVATQRGPALELTHWDPELAVSAAELAAEENRIREMEEQNLIIDRPPKFNRVKLPKGLNLSKGEMRKIMQFRDLPYFSPYSDFSGLRPGSREKEKHACGVVHEILSLTLEKRTLVDHFTHFREEFRFSQQLRGMLIRHPDMFYVSLKGDRDSVFLREGYRDSQLVEKDRLLLIKEKLRTLVNVPRFPKGPARRIVEDSMRESDGREDESGQEEEEWSEDVDNLLSDDDWSDEDDDDLPPDFDEDGELLEIGQGKTIKQDSRQNDEMVLLPVFADGRPREQW* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0027 506 Coils Coil 244 264 - -
Gso3g0027 506 MobiDBLite consensus disorder prediction 417 488 - -
Gso3g0027 506 Pfam Plant organelle RNA recognition domain 79 407 IPR021099 GO:0003723
Gso3g0027 506 MobiDBLite consensus disorder prediction 417 431 - -
Gso3g0027 506 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 12 467 IPR045040 GO:0003723
Gso3g0027 506 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 12 467 IPR040293 GO:0000373|GO:0003723
Gso3g0027 506 MobiDBLite consensus disorder prediction 432 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0027 Gso-Chr3 254475 256419 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0027 - - gmx:100810556 895.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0919 7 10712227 10714208 Gso3g0027 3 254475 256419 GST