Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0701 ATGCTAGTTCCTCATCCTTCAATGCTAATTGCACCTCAAAACACCGTAGAAAATCATGACAACATCATGGAAGGACAGAAACTACACTTTGATGGATCTTTGATGCCAAACCAATCCAACATACCCTCCCAGTTCATATGGCCTGATCATGAAAAACCATGCCTAACACCACCAGAACTCCAAATTCCACCCATTGACTTGAAGTGCTTTCTCTCAGCAGATCCACAAGCTTTGTCAACAGTTTGTGCTGAATTGAGTGAGGCATGCAAGAAGCATGGCTTCTTCCTTGTTGTCAACCATGGAGTTGATAGCAAGCTCATAGCTCAAGCTCATAAGCTCATAGATGATTTCTTCTGCATGCAACTCTCACAGAAGCAGAAGGCTCAGAGAAAGATTGGAGAACATTGTGGCTATGCTAATAGCTTCATTGGAAGATTCTCCTCCAAACTTCCTTGGAAGGAAACACTTTCTTTCCATTATTCTGCAGATAAATCCAGAAAAACTGTGGAGGATTATTTCCTTAATGTCATGGGGGAAGATTTCAAGCAATTTGGGAGTGTGTTCCAAGAATACTGTGAAGCCATGAGCAAACTCTCTCTTGGGATAATGGAGCTTCTGGGGATGAGCCTAGGAGTTGGCAGGGAATGTTTCAGAGATTTCTTCGAAGGAAATGAGTCGGTTATGAGGTTGAATTACTACCCACCATGCCAAAAACCTGAGTTAGCTTTAGGAACTGGACCTCATTGTGACCCTACATCCCTAACCATTCTCCACCAAGATCAAGTCGAGGGCCTCCAAGTCTTTGTTGATGGAAGATGGTACTCTGTCGCTCCTAAAGAAGATGCTTTCGTTGTCAATATTGGCGACACATTTATGGCTCTATCGAATGGGATGTTCAAGAGTTGCTTGCATAGAGCAGTTGTAAACAACAAAATTGTGAGAAAATCACTTGCTTTCTTCCTATGTCCAAATAGAGACAAAGTGGTCACCCCTCCAAAAGATCTAATCAGCTACGAAAATTCAAGAACATACCCAGATTTCACATGGCCAAGCCTTCTTGAATTTACACAGAAACACTACAGATCTGACACAAAAACACTTGATGCTTTCTCGAGATGGCTACTAGAAAAAAACAATCCGAACAGGGGTGCCCCCACAAATGTTCCATGGCCAACAAAATCTATAAACTGA 1191 0.4223 MLVPHPSMLIAPQNTVENHDNIMEGQKLHFDGSLMPNQSNIPSQFIWPDHEKPCLTPPELQIPPIDLKCFLSADPQALSTVCAELSEACKKHGFFLVVNHGVDSKLIAQAHKLIDDFFCMQLSQKQKAQRKIGEHCGYANSFIGRFSSKLPWKETLSFHYSADKSRKTVEDYFLNVMGEDFKQFGSVFQEYCEAMSKLSLGIMELLGMSLGVGRECFRDFFEGNESVMRLNYYPPCQKPELALGTGPHCDPTSLTILHQDQVEGLQVFVDGRWYSVAPKEDAFVVNIGDTFMALSNGMFKSCLHRAVVNNKIVRKSLAFFLCPNRDKVVTPPKDLISYENSRTYPDFTWPSLLEFTQKHYRSDTKTLDAFSRWLLEKNNPNRGAPTNVPWPTKSIN* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0701 396 SUPERFAMILY Clavaminate synthase-like 31 363 - -
Gso7g0701 396 Pfam 2OG-Fe(II) oxygenase superfamily 225 323 IPR044861 -
Gso7g0701 396 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 223 323 IPR005123 -
Gso7g0701 396 Pfam non-haem dioxygenase in morphine synthesis N-terminal 62 166 IPR026992 -
Gso7g0701 396 PANTHER GIBBERELLIN 20-OXIDASE 21 375 - -
Gso7g0701 396 Gene3D - 34 362 IPR027443 -
Gso7g0701 396 PRINTS Isopenicillin N synthase signature 85 102 - -
Gso7g0701 396 PRINTS Isopenicillin N synthase signature 248 269 - -
Gso7g0701 396 PRINTS Isopenicillin N synthase signature 283 309 - -
Gso7g0701 396 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 21 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0701 Gso-Chr7 7632820 7635768 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0701 20 371 Glycosyltransferase AT5G59530 28.142 2.45e-32 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0701 K05282 - gmx:100775693 829.706
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0701 7 7632820 7635768 Gso7g0701 7 7632820 7635768 ECH
Gso7g0701 7 7632820 7635768 Gso3g0159 3 2026253 2029062 GST