Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0159 ATGCTAGTCCCTCATCATCCTTCAATGCTAATTGCACCTCAAAACACATCCGCAGAAAATCATGACAACATGGAAGGACAGAAACAACTACACCACTTTGATGAATCTTTGATGCCAAACCAGTCCAACATACCCTCCCAGTTCATATGGCCTGATCATGAAAAACCATGCTTAACACCACCAGAACTCCATATTCCACCCATTGACTTGAAGGCTTTTCTCTCAGGAGATCCACAAGCTGTGTCAGCAATTTGTGCAGAAGCCAATGAGGCATGCAAGAAGCATGGCTTCTTCCTTGTTGTCAACCATGGTGTTGATAGAAAGCTCATAGCTCAAGCTCATAAGCTCATAGATGATTTCTTCTGCATGCAGCTGTCACAGAAGCAGAAGGCTCAGAGAAAGATTGGAGAACATTGTGGCTATGCTAATAGCTTCATGGGAAGATTCTCCTCCAAACTTCCTTGGAAGGAAACACTTTCTTTCCATTATTCTGCTGATAAATCCAGCAAAAGTGTGGAGGATTATTTCCTAAATGTCATGGGGGAGGATTTCAGGAAATTTGGGAGTGTGTTCCAAGAATACTGTGAAGCCATGAGCAAACTCTCTCTTGGGATCATGGAGCTTCTGGGGATGACCCTAGGAGTTGGCAGGGAATGTTTCAGAGATTTCTTCGAAGGAAATGAGTCGGTTATGAGGTTGAATTACTACCCACCATGCCAAAAACCTGAGTTAGCTTTAGGAACAGGACCTCATTGTGACCCTACATCCCTAACCATTCTCCACCAAGATCAAGTCGAGGGCCTCCAAGTCTTCGTTGATGGAAGATGGTACTCTGTCGCTCCTAAAGAAGATGCTTTCGTTGTCAATATTGGCGATACATTTATGGCTCTATCGAATGGGTTGTTCAAGAGTTGCATGCATAGAGCAGTTGTAAACAACAAAATTGTGAGAAAATCACTTGCTTTCTTCCTATGTCCAAATAGAGACAAAGTGGTCACCCCTCCAGAAGATCTAATCAGCAACGAGAATCCAAGAACATACCCAGATTTCACATGGCCAAGCCTTCTTGAATTCACACAGAAACACTACAGGTCTGACACAGAAACACTTGATGCTTTCTCGAGGTGGCTACTAGAGAAAAACAACTGA 1149 0.4334 MLVPHHPSMLIAPQNTSAENHDNMEGQKQLHHFDESLMPNQSNIPSQFIWPDHEKPCLTPPELHIPPIDLKAFLSGDPQAVSAICAEANEACKKHGFFLVVNHGVDRKLIAQAHKLIDDFFCMQLSQKQKAQRKIGEHCGYANSFMGRFSSKLPWKETLSFHYSADKSSKSVEDYFLNVMGEDFRKFGSVFQEYCEAMSKLSLGIMELLGMTLGVGRECFRDFFEGNESVMRLNYYPPCQKPELALGTGPHCDPTSLTILHQDQVEGLQVFVDGRWYSVAPKEDAFVVNIGDTFMALSNGLFKSCMHRAVVNNKIVRKSLAFFLCPNRDKVVTPPEDLISNENPRTYPDFTWPSLLEFTQKHYRSDTETLDAFSRWLLEKNN* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0159 382 Pfam 2OG-Fe(II) oxygenase superfamily 228 326 IPR044861 -
Gso3g0159 382 Pfam non-haem dioxygenase in morphine synthesis N-terminal 65 170 IPR026992 -
Gso3g0159 382 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 226 326 IPR005123 -
Gso3g0159 382 PRINTS Isopenicillin N synthase signature 88 105 - -
Gso3g0159 382 PRINTS Isopenicillin N synthase signature 251 272 - -
Gso3g0159 382 PRINTS Isopenicillin N synthase signature 286 312 - -
Gso3g0159 382 Gene3D - 33 365 IPR027443 -
Gso3g0159 382 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 23 378 - -
Gso3g0159 382 PANTHER GIBBERELLIN 20-OXIDASE 23 378 - -
Gso3g0159 382 SUPERFAMILY Clavaminate synthase-like 33 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0159 Gso-Chr3 2026253 2029062 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0159 25 364 Glycosyltransferase AT5G59530 28.242 1.05e-32 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0159 K05282 - gmx:100777224 797.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0701 7 7632820 7635768 Gso3g0159 3 2026253 2029062 GST