Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0661 ATGGCCACCACTTCTGCTTCATTCGCGAGCTTCTCCGTCATCTTGCGACCTTCTTCGTCCAATCCCCAATTCTTCCTCTTCAACGTCGCTCCCCGAACCGGAACCTCTCATTCCCGAACCCGTTCGACTCGGTTCAGGTGCTCGGCCGGTCAGACCGGGTTCTTCACGAAACTAGGGCGGTTGATAAAGGAGAAGGCGAAGAGCGACGTGGAGAAGCTTTTCTCGGGATTCTCCAAGACCCGCAGCAACCTCGCCGTCATCGACGAGCTTCTCCTCTATTGGAACCTCGCCGACACCGATCGGGTCCTCGACGAACTCGAAGAGGCTCTTTTAGTGTCTGATTTTGGTCCAAGAATCACTATTAAAATAGTGGAGAATTTGCGCGAGGATATATTTTCAGGGAAGCTTAAATCAGGGAATGAGATAAAGGAAGCACTGAAGAGGAATGTTTTGGAATTATTAACCTCCAAGGGGAGTAAAACTGAACTTCAACTTGGATACAGGAAGCCAGCTGTAATAATGATAGTTGGTGTTAACGGTGGAGGGAAGACTACATCTTTGGGAAAGCTGGCCTATAGATTGAAGAATGAAGGGGCTAAGATATTGATGGCTGCTGGTGATACATTTAGAGCAGCTGCTAGTGATCAGTTGGAAATATGGGCCGGACGGACTGGGTGTGAGATTGTTGTGGCTGAATCAGAGAAAGCAAAAGCATCATCAGTGCTTTCACAGGCTGTAAAAAAGGGAAAAGAGCTAGGTTTTGATATTGTATTATGTGATACATCTGGGCGTTTACACACTAATTACAGCTTAATGGAAGAGTTGATTTCCTGTAAAAAATCTGTTGCTAAGGTCATTCCTGGCGCACCTAATGAGATCCTACTGGTTCTGGATGGGACTACCGGTTTGAATATGTTGCCACAAGCAAGAGAATTCAATGATGTTGTGGGTGTTACTGGTTTAATTTTGACCAAACTGGATGGTTCTGCTAGAGGTGGCTGTGTGGTCAGTGTGGTTGATGAGCTTGGAATCCCTGTAAAATTTGTGGGTGTTGGTGAAGGTGTTGAAGACCTTCAACCCTTTGATGCGGAGTCCTTTGTGAATGCCATTTTTATTTAA 1119 0.4602 MATTSASFASFSVILRPSSSNPQFFLFNVAPRTGTSHSRTRSTRFRCSAGQTGFFTKLGRLIKEKAKSDVEKLFSGFSKTRSNLAVIDELLLYWNLADTDRVLDELEEALLVSDFGPRITIKIVENLREDIFSGKLKSGNEIKEALKRNVLELLTSKGSKTELQLGYRKPAVIMIVGVNGGGKTTSLGKLAYRLKNEGAKILMAAGDTFRAAASDQLEIWAGRTGCEIVVAESEKAKASSVLSQAVKKGKELGFDIVLCDTSGRLHTNYSLMEELISCKKSVAKVIPGAPNEILLVLDGTTGLNMLPQAREFNDVVGVTGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAESFVNAIFI* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0661 372 PANTHER BNAA04G26420D PROTEIN 21 371 - -
Gso7g0661 372 Pfam SRP54-type protein, GTPase domain 170 371 IPR000897 GO:0005525|GO:0006614
Gso7g0661 372 SMART SRP54_N_2 73 154 IPR013822 GO:0005525|GO:0006614
Gso7g0661 372 Gene3D - 162 372 IPR027417 -
Gso7g0661 372 ProSitePatterns SRP54-type proteins GTP-binding domain signature. 345 358 IPR000897 GO:0005525|GO:0006614
Gso7g0661 372 SUPERFAMILY Domain of the SRP/SRP receptor G-proteins 70 147 IPR036225 -
Gso7g0661 372 Gene3D - 60 161 IPR042101 -
Gso7g0661 372 CDD FtsY 171 370 - -
Gso7g0661 372 SMART AAA_5 169 342 IPR003593 -
Gso7g0661 372 PANTHER SIGNAL RECOGNITION PARTICLE RECEPTOR SUBUNIT ALPHA 21 371 - -
Gso7g0661 372 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 167 370 IPR027417 -
Gso7g0661 372 TIGRFAM ftsY: signal recognition particle-docking protein FtsY 99 371 IPR004390 GO:0006614
Gso7g0661 372 Pfam SRP54-type protein, helical bundle domain 98 148 IPR013822 GO:0005525|GO:0006614
Gso7g0661 372 SMART SRP54_3 170 372 IPR000897 GO:0005525|GO:0006614
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0661 Gso-Chr7 7013166 7021569 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0661 K03110 - gmx:100809203 699.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0661 7 7013166 7021569 Gso7g0661 7 7013166 7021569 ECH
Gso7g0661 7 7013166 7021569 Gso3g0126 3 1514153 1522481 GST