LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso3g0126	ATGGCTACCACTTCTGCTTCATTCGCTCGCTTCTCCGTCATATCGCGACCTTCTTCGTCAAATCCCCAATTCATCCTCTTCAACGCCGCTCCCCGAACCGGAACCCCTCATTCCCGAACCGGTTCGGCCCGGTTCAGGTGCTTGGCCGGCCAGACCGGGTTCTTCACGAAACTAGGGCGGTTGATAAAGGAGAAGGCGAAGAGCGACGTGGAGAAGCTCTTCTCGGGATTCTCCAAGACCCGCAGCAACCTCGCCGTCATCGACGAGCTTCTCCTCTATTGGAACCTCGCCGACACCGACCGCGTCCTCGACGAACTCGAAGAGGCTCTTTTAGTGTCCGATTTTGGACCAAGAATCACTATTAAAATAGTGGAGAATTTGCGTGAGGATATATTTTCAGGGAAGCTTAAATCAGGGAATGAGATAAAGGAAGCACTGAAGAGGAACGTTTTGGAATTATTAACTTCCAAGGGGAGTAAAACTGAACTTCAACTTGGATACAGGAAGCCAGCTGTAATAATGATAGTTGGTGTTAATGGTGGAGGGAAGACTACATCTTTGGGAAAGCTGGCCTATAGATTGAAGAATGAAGGGGCTAAGATATTGATGGCAGCTGGTGATACATTTAGAGCAGCTGCTAGTGATCAGTTGGAAATATGGGCCGAAAGGACTGGGTGTGAGATTGTTGTGGCTGAATCAGAGAAAGCGAAAGCATCATCAGTGCTTTCACAGGCTGTAAAAAAGGGAAAAGAGCTAGGTTTTGATATTGTATTATGTGATACATCTGGGCGTTTACACACTAATTACAGCCTAATGGAAGAGTTGATTTCCTGTAAAAAGTCTGTTGCTAAAGTCGTTCCTGGTGCACCTAATGAGATTCTACTGGTTCTGGATGGGACTACCGGTTTGAATATGTTGCCACAAGCGAGAGAATTCAATGATGTTGTGGGTGTTACTGGTTTAGTTTTGACCAAACTGGATGGTTCTGCTAGAGGTGGCTGTGTGGTTAGCGTGGTTGATGAGCTTGGAATCCCTGTAAAATTTGTGGGTGTTGGTGAAGGTGTTGAAGACCTTCAACCTTTTGATGCGGAAGCCTTTGTCAATGCCATTTTTATGTAA	1119	0.4638	MATTSASFARFSVISRPSSSNPQFILFNAAPRTGTPHSRTGSARFRCLAGQTGFFTKLGRLIKEKAKSDVEKLFSGFSKTRSNLAVIDELLLYWNLADTDRVLDELEEALLVSDFGPRITIKIVENLREDIFSGKLKSGNEIKEALKRNVLELLTSKGSKTELQLGYRKPAVIMIVGVNGGGKTTSLGKLAYRLKNEGAKILMAAGDTFRAAASDQLEIWAERTGCEIVVAESEKAKASSVLSQAVKKGKELGFDIVLCDTSGRLHTNYSLMEELISCKKSVAKVVPGAPNEILLVLDGTTGLNMLPQAREFNDVVGVTGLVLTKLDGSARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVNAIFM*	373

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso3g0126	372	SMART	SRP54_N_2	73	154	IPR013822	GO:0005525\|GO:0006614
	Gso3g0126	372	ProSitePatterns	SRP54-type proteins GTP-binding domain signature.	345	358	IPR000897	GO:0005525\|GO:0006614
	Gso3g0126	372	PANTHER	SIGNAL RECOGNITION PARTICLE RECEPTOR SUBUNIT ALPHA	30	371	-	-
	Gso3g0126	372	Pfam	SRP54-type protein, GTPase domain	170	371	IPR000897	GO:0005525\|GO:0006614
	Gso3g0126	372	SUPERFAMILY	Domain of the SRP/SRP receptor G-proteins	70	147	IPR036225	-
	Gso3g0126	372	TIGRFAM	ftsY: signal recognition particle-docking protein FtsY	99	371	IPR004390	GO:0006614
	Gso3g0126	372	CDD	FtsY	171	370	-	-
	Gso3g0126	372	SMART	AAA_5	169	342	IPR003593	-
	Gso3g0126	372	Gene3D	-	162	372	IPR027417	-
	Gso3g0126	372	SMART	SRP54_3	170	372	IPR000897	GO:0005525\|GO:0006614
	Gso3g0126	372	Pfam	SRP54-type protein, helical bundle domain	98	148	IPR013822	GO:0005525\|GO:0006614
	Gso3g0126	372	Gene3D	-	60	161	IPR042101	-
	Gso3g0126	372	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	167	370	IPR027417	-
	Gso3g0126	372	PANTHER	BNAA04G26420D PROTEIN	30	371	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso3g0126	Gso-Chr3	1514153	1522481	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso3g0126	K03110		-	gmx:100791073	715.301

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gso7g0661	7	7013166	7021569	Gso3g0126	3	1514153	1522481	GST