Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0650 ATGGGAGAAGCTACAGAAAGGTATGCAGTTGTGACAGGTGCAAACAAAGGAATTGGATTAGAGATAGTTAGACAATTAGCTTCAGCTGGAATCAAGGTGGTTCTCACAGCAAGAAATGAAGAAAGGGGTCTCAAAGCACTGGAAACAGTCAAGGACTCAGGTCTATCTCACCTTGTACTGTTTCATCAAGTGGATGTGGCTGATGCAACAAGTGTAGCTTCTCTGGCAGATTTTATCAAATCTAAATTTGGGAAACTTGATATTCTGATTAACAATGCAGGGATTAGTGGAGTTGTAATTGATGACACTGATTTAATCACTACAGTCATCAAGAATCGTGGGGCTAAACCAGAATATGATGGGACAAAGGGAGTAACTCATACATATGAGTTAGCCGAAGAATGCTTGCAAATAAATTACTATGGCGCTAAAAAAACTACAGAATCCCTTATGCCCCTCCTCCAATTATCTGATTCGCCAAGAATTGTGAATGTCTCATCCTCTCTGGGACAGTTAGAGAGTTTGCCAAAAGGATCATGGGCCAGAGGAGTCTTCAATGATGTTGATAACCTTACTGCAGAGATAGTGGATGAAATATTGAACAAGTTTCTCAGAGATTTCAAAGAAGGTTCATTGGAAAGTAAAGGCTGGCCTAAGTATCTGAGTGCCTATATTGTCTCTAAAGCTGCTATGAATGCCTATACTAGAATCCTTGCAAAGAAATACCCTTCATTCTGCATCAATAGTGTTTGCCCTGGCTACGTCAAGACAGATATAACTGCCAACACCGGCATCTTAACAGTTGAAGAAGGTGCTGCTAGTCCTGTGAGGTTACTCTCATCCCAATTTCATGAATTATGA 861 0.4053 MGEATERYAVVTGANKGIGLEIVRQLASAGIKVVLTARNEERGLKALETVKDSGLSHLVLFHQVDVADATSVASLADFIKSKFGKLDILINNAGISGVVIDDTDLITTVIKNRGAKPEYDGTKGVTHTYELAEECLQINYYGAKKTTESLMPLLQLSDSPRIVNVSSSLGQLESLPKGSWARGVFNDVDNLTAEIVDEILNKFLRDFKEGSLESKGWPKYLSAYIVSKAAMNAYTRILAKKYPSFCINSVCPGYVKTDITANTGILTVEEGAASPVRLLSSQFHEL* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0650 286 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 IPR002347 -
Gso7g0650 286 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 168 IPR002347 -
Gso7g0650 286 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 224 243 IPR002347 -
Gso7g0650 286 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 7 278 - -
Gso7g0650 286 Pfam short chain dehydrogenase 8 172 IPR002347 -
Gso7g0650 286 PANTHER SHORT-CHAIN DEHYDROGENASE/REDUCTASE 7 278 - -
Gso7g0650 286 Gene3D - 3 285 - -
Gso7g0650 286 PRINTS Glucose/ribitol dehydrogenase family signature 8 25 IPR002347 -
Gso7g0650 286 PRINTS Glucose/ribitol dehydrogenase family signature 84 95 IPR002347 -
Gso7g0650 286 PRINTS Glucose/ribitol dehydrogenase family signature 224 243 IPR002347 -
Gso7g0650 286 PRINTS Glucose/ribitol dehydrogenase family signature 243 260 IPR002347 -
Gso7g0650 286 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 280 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0650 Gso-Chr7 6920524 6924491 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0650 10 264 Acyl Lipid Metabolism Gene Families AT1G24360 22.868 8.76e-11 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0650 K15095 - gmx:100807079 539.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0650 7 6920524 6924491 Gso7g0650 7 6920524 6924491 ECH
Gso7g0650 7 6920524 6924491 Gso3g0119 3 1426921 1429784 GST
Gso7g0650 7 6920524 6924491 Gso18g1995 18 52533657 52536316 PCT