Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0571 ATGCAGAACCAACAGCTTCTGTCCAAGATTGCCAACAATGACAAACATGGAGAGAATTCTCCATATTTTGATGGGTTGAAGGCATATGATAGAAACCCATTTCACCCTAAAAAAAATCCTCAAGGTGTTATCCAGATGGGTCTTGCTGAAAATCAGCTCTGCTTTGATCTGATTGAAGAGTGGATAAGAAATAATCCCAAGACTTCCATTTGCACTCCTGAAGGAGTGCATCAGTTCAGAAATATTGCTAACTTTCAGGACTATCATGGGTTGCGAGAGTTCACAAATGCAATGGCAAATTTTATGTCAAAAGTGAGAGGAGGTAGGGTCAAATTTGATGCAGACCGTATATTGATGAGTGGAGGGGCAACAGGGGCAAATGAACTAATCATGTTCTGCTTGGCTGATCCTGGAGATGCTTTTATGATTCCTACCCCATTTTATCCAGGATTCGTCCGTGACTTGTGTTGGAGAACTGGGGTGCAATTAATCCCTGTCCACTGTGATAGCTCCAACAACTTCAAGATAACAAGAGAAGCTCTTGAAGTAGCTTATAAAAAAGCCAAAGAGGACAACATCAACGTGAAGGGGTTGATCATAACAAACCCTTCTAACCCTTTGGGCACAACATTAGACAAGGACACGTTGAAGAGCCTAGTGAGCTTCATCAACGAGAAAAACATTCACTTGGTTTGTGATGAAATCTATGCTGCCACTGTTTTCAGCTCCCCTAGTTATGTGAGCGTTGCTGAAGTGATTCAAGAAATGAAACATTGCAAACGTGACCTAATTCATGTGATTTATAGTTTGTCTAAGGATATGGGATACCCTGGCTTCAGAGTTGGCATAGTTTATTCATTCAACGATGAAGTGGTGAATTGTGGAAGGAAAATGTCGAGTTTCGGATTAGTCTCTACGCAAACTCAACACATGTTGGCATCAATGCTCTCGGATGAAAAGTTTGTAACTAGGTTTCTTTCGGAGAATTCGAGGAGGTTGGAACAAAGGCATGACAAGTTCATGAAGGGGCTTGAAGAGGTTAACATTACTCGATTCCCAAGCAATGCTGGACTTTTCTGCTGGATGAACCTGAAGTGTTTGTTGGAGGAACCAACGTTTGAAGCTGAGTTGAAGCTATGGCGTGTGATTATTCATGAGGTGAAGCTCAATGTTTCACCAGGCTCTTCCTTCAATTGTTCTGAGCCTGGTTGGTTTAGGGTTTGCTTTGCCAACATGGATGATGAAACTGTGGATGTTGCACTCAACAGGATTCGTGCATTCGTGGGTAAAGAAACTAAGAAACCTGTGGGATTCAAACGTTGGCAACCGAATCTTAGGCTCAGTTTTTCTTCAAGGATGTTTGAGGAGAGTGTTATGTCTCCTCACTCGCCTATTCCTACGTCACCACTTATTGGAGCTACTTGA 1425 0.4225 MQNQQLLSKIANNDKHGENSPYFDGLKAYDRNPFHPKKNPQGVIQMGLAENQLCFDLIEEWIRNNPKTSICTPEGVHQFRNIANFQDYHGLREFTNAMANFMSKVRGGRVKFDADRILMSGGATGANELIMFCLADPGDAFMIPTPFYPGFVRDLCWRTGVQLIPVHCDSSNNFKITREALEVAYKKAKEDNINVKGLIITNPSNPLGTTLDKDTLKSLVSFINEKNIHLVCDEIYAATVFSSPSYVSVAEVIQEMKHCKRDLIHVIYSLSKDMGYPGFRVGIVYSFNDEVVNCGRKMSSFGLVSTQTQHMLASMLSDEKFVTRFLSENSRRLEQRHDKFMKGLEEVNITRFPSNAGLFCWMNLKCLLEEPTFEAELKLWRVIIHEVKLNVSPGSSFNCSEPGWFRVCFANMDDETVDVALNRIRAFVGKETKKPVGFKRWQPNLRLSFSSRMFEESVMSPHSPIPTSPLIGAT* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0571 474 CDD AAT_like 84 426 - -
Gso7g0571 474 Gene3D Aspartate Aminotransferase, domain 1 32 423 IPR015422 GO:0003824
Gso7g0571 474 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 46 72 - -
Gso7g0571 474 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 79 95 - -
Gso7g0571 474 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 116 136 - -
Gso7g0571 474 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 138 159 - -
Gso7g0571 474 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 192 216 - -
Gso7g0571 474 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 228 251 - -
Gso7g0571 474 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 263 287 - -
Gso7g0571 474 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 295 318 - -
Gso7g0571 474 PANTHER 1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 1 445 - -
Gso7g0571 474 Pfam Aminotransferase class I and II 44 424 IPR004839 GO:0009058|GO:0030170
Gso7g0571 474 Gene3D - 66 318 IPR015421 GO:0003824
Gso7g0571 474 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 1 445 - -
Gso7g0571 474 SUPERFAMILY PLP-dependent transferases 13 429 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0571 Gso-Chr7 6057904 6061480 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0571 K20772 - gmx:100817401 974.541
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0571 7 6057904 6061480 Gso7g0571 7 6057904 6061480 ECH
Gso7g0571 7 6057904 6061480 Gso16g0262 16 3001588 3005592 GST
Gso18g1928 18 51703086 51706904 Gso7g0571 7 6057904 6061480 PCT
Gso9g2101 9 45303506 45307046 Gso7g0571 7 6057904 6061480 PCT
Gso7g0571 7 6057904 6061480 Gso18g1928 18 51703086 51706904 PCT
Gso7g0571 7 6057904 6061480 Gso9g2101 9 45303506 45307046 PCT