Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0521 ATGGCGGCCTTCGACCACTTTGGGAACATGTACGACGTTGCATTCAAACCCCGCTTGCTTCAAACCCTCATCAGAGACCACCTCCCGGACGAGAAACGCCCTTTTTCGAACCCTTCAGAACTCTCCAAGGTCGTTTCGTTGATCAAAACGCACTCTCTTCTCTCCGAGTCTTTCGCAGATTCCACGCGCCCCAAACTCATCGCAGCATGGAAATCCGCACTCGCTTCCTGGCTCAACCTCATTTACTCCCTCCTTTCTACCACCATGCCAGATAAATGCTGGGCGGGTATCTCCCTGTTGGGGGTTACTTGTGAAGAGTGCAGCTCTGAGCGTTTCCTAGAATCTTACTCTGTGTGGTTCCAAAAGTTGCTGTTTTTTCTACAGTCACCTTCAGATTCTCATTTAGTGAGGGTAGCTGCTTGTGCTTCGATGTCTGATTTATTTGCAAGGTTAGGTGGATATCCTAAGATCAAGAAAGATTCATCTTCCTGTGCTGTGAAAGTTGTTCAGCCTACTTTGAAGATCTTGAATGATGAGAACTCAGAGGCAATATGGGATGCTGCAGTTCATTTGTTATGTACCATAATAACTTCATTCCCATTTTCTATTCGTAATCATTATGATAGTGTTGAATCTGCTATTGCTTTAAAACTTTTGTCTGGAGGATGCAGTCTAGATATGTCAAAGAAACTCGCACATTGCCTCACACTGCTTCCAAAATCAAAAGGAGATGAAGAAAGCTGGTCTGTGATGATGCAGAAAATTTTGGTGTTAATAAATGATCAATTAAATTTAGCCTTTCATGGTCTAGAAGAAGAAACCCTGCGTAATGAGGTTACTAGGCTGTTGGTTTTGCCAGGAAAACATCCTCCACCACCATTAGGAGGCTATATATTGGCAGAAGAAGTTCTTAACAAGGCATCAAAAACATCTGAGCAATCACTGATGTCTAATGCCTCTAGACTTATGTTTGGCTGCTGTCTGTTGCTTAAAAATTCATATCCTGTTAAGGTAAATGTGCCTGTTCGCCTGTTATTGGGCTTTGTTGAGAGAATTCTGATGGTAAATGGCTCTTTGCCACAAATGTCATTGCCATTCATGACTGCCAAGCAGCAAGAGAACATTTGTTCAGAACTTCCAGTTTTGCACTTGAGTAGCTTGGAATTGCTTACGGCTATCATAAAGGCCATGGGCAGTCAACTATTACCACATGCTGCCTATATTGTACGTATCATTACAAAGTACTTCAAGACATGTAAACTGCCAGAATTAAGGATTAAGGTCTATTCAGTCACAAGGAATTTGCTCATAACCATGGGTGTTGGAATGGCTTTATACCTTGCACAGGAAGTTATAAACAATGCTTTTGCTGATTTAAGTATTATTGAGCATAAGAATAGTGGCATATTAAATGGTTCAAATTCAAATGCTTCTGCTGGAGCACTGCTACTGCCAATTCATAGAAAACGGAAGCACAGCAGTACAACTGGTTCTCTTCAAGAGCATGGTGAAGGTGGTTTGAGTGTGGAAGTTCCCAAGAATCGTCCATTGACTCCAGTTTCTCTGAGGATTGCTGCACTTGAGACATTGGAATCTCTTATTACTGTGGCTGGTGCTTTAAAATCTGAACCATGGAGATCAAAAGTTGATAGCCTCTTGTTAGTCACAGCAATGGACTCTTTTAAGGAAGGATCAGTTAGTGAAGAAAGAAGTGTGTTTCAACAAAAGGAACCTGCTGCAACTACCACAGAGTTGCAGCTTGCTGCATTGCGTGCTTTATTGGTATCTTTACTTTCATTTGCTCGGGTACGACCTCCATATTTAGCCCAGGGTCTTGAACTTTTCCGTAGAGGGAGGCAACAAACTGGAACAAAACTAGCTGAGTTCTGTGCCCATGCTCTGTTAACCTTGGAGGTGCTTATACATCCTAGGGCACTTCCAATGGTAGATTATGCCTATGCAAATAACAGTTCCTTTGGTGAAGCTCATAGTAATCTCCAACATGGATATTTTGGTTGGAGCCACAATACGCCATATGGCTTACCGCAAGTTCCTCCTGACTATGATGATGATCTGTGTGCAAGATGGCTTGAAAATGACAATGAAGTTGGTGAATCATTGGATAAAAATACAAAATACACCCAGGAGCCTTCTGAAGCTTGCAGAGCTAGTGATCCTGAAGTGCTTTTCGTGCATGTATCTTCCGACACCAATATACAGGAGAGGATTGAGATGGTGTCTGAGACTGCCACTTGTGCAGATGTTGAGATGAAAACTGTTGAGGATGAAACCAATTTCAAGTCAGATCAACCAGGAGAATCTGTGGTGCAATTTCAAGAAACTGTTTCTTGCACCACAAACATCCCCGTGGTTGAAACTCGCGGTGATGTAGCTGATGATAAAGTGTCTGAGAAGATTGTTTCAGACAACTCCATTCCTCATAATGAAGCCAGTCATATGGAATCAAGACATGGAAGCTCGGTTAATAAAGACTTCAAATTCTCTTCTCCGAGTAGTAGTTTATGGCATAGAACCTCAGGCTCTAATATTTTTGAGGAATTTGCTTTTCAATTGGAACATGATAAGGCACTGGCGGATGAAGATGATTTTCCTGATATTGTGGATGGAGACCCAGATTCTGATACTGAATAA 2652 0.4204 MAAFDHFGNMYDVAFKPRLLQTLIRDHLPDEKRPFSNPSELSKVVSLIKTHSLLSESFADSTRPKLIAAWKSALASWLNLIYSLLSTTMPDKCWAGISLLGVTCEECSSERFLESYSVWFQKLLFFLQSPSDSHLVRVAACASMSDLFARLGGYPKIKKDSSSCAVKVVQPTLKILNDENSEAIWDAAVHLLCTIITSFPFSIRNHYDSVESAIALKLLSGGCSLDMSKKLAHCLTLLPKSKGDEESWSVMMQKILVLINDQLNLAFHGLEEETLRNEVTRLLVLPGKHPPPPLGGYILAEEVLNKASKTSEQSLMSNASRLMFGCCLLLKNSYPVKVNVPVRLLLGFVERILMVNGSLPQMSLPFMTAKQQENICSELPVLHLSSLELLTAIIKAMGSQLLPHAAYIVRIITKYFKTCKLPELRIKVYSVTRNLLITMGVGMALYLAQEVINNAFADLSIIEHKNSGILNGSNSNASAGALLLPIHRKRKHSSTTGSLQEHGEGGLSVEVPKNRPLTPVSLRIAALETLESLITVAGALKSEPWRSKVDSLLLVTAMDSFKEGSVSEERSVFQQKEPAATTTELQLAALRALLVSLLSFARVRPPYLAQGLELFRRGRQQTGTKLAEFCAHALLTLEVLIHPRALPMVDYAYANNSSFGEAHSNLQHGYFGWSHNTPYGLPQVPPDYDDDLCARWLENDNEVGESLDKNTKYTQEPSEACRASDPEVLFVHVSSDTNIQERIEMVSETATCADVEMKTVEDETNFKSDQPGESVVQFQETVSCTTNIPVVETRGDVADDKVSEKIVSDNSIPHNEASHMESRHGSSVNKDFKFSSPSSSLWHRTSGSNIFEEFAFQLEHDKALADEDDFPDIVDGDPDSDTE* 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0521 883 Pfam rRNA processing/ribosome biogenesis 23 220 IPR012583 -
Gso7g0521 883 MobiDBLite consensus disorder prediction 862 883 - -
Gso7g0521 883 PANTHER PROLINE-, GLUTAMIC ACID- AND LEUCINE-RICH PROTEIN 1 9 881 - -
Gso7g0521 883 Gene3D - 18 224 IPR011989 -
Gso7g0521 883 MobiDBLite consensus disorder prediction 810 830 - -
Gso7g0521 883 SUPERFAMILY ARM repeat 74 456 IPR016024 -
Gso7g0521 883 PANTHER PROLINE-, GLUTAMIC ACID- AND LEUCINE-RICH PROTEIN 1 9 881 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0521 Gso-Chr7 5300751 5309958 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0521 - - gmx:100800871 1686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0521 7 5300751 5309958 Gso16g0227 16 2678551 2687751 GST