Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0227 ATGGCGGCCTTCGACCACTTCGGGAACATGTACGACGTTGCTTTCAAGCCCCGCTTGCTTCAAACCCTCATAAGAGACCACCTCCCCGATGAGAAACGCCCCTTTTCGAACCCTTCAGAACTCTCCAAAGTCGTGTCTTTGATCAAAACGCACTCTCTCCTCTCTGAGTCTTTTGCAGATTCCACGCGCCCCAAACTCATCGAAGCATCGAAATCCGCACTCACTTCCTGGCTCAACCGCATTTACTCCCTCCTTTCCACCACCATGCCAGATAAATGCTTGGCGGGGATCTCTCTGTTGGGGGTTACTTGTGAAGAGTGCAGCTCTGAGCGTTTCCTAGAATCTTACTCTGTGTGGTTCCAAAAGTTGCTGTCTTTTCTTCAGTCACCTGCAGATTCTCATTTAGTGAGGGTAGCTGCCTGTGCTTCAATGTCTGATTTATTTGCAAGGTTAGGTGGATATCCCAAGATCAAGAAAGATTCATCTTCCTGTGCTGTGAAAGTTGTTCAGCCTACTTTGAAGATGTTGAATGATGAGAACTCAGAGGCAATATGGGATGCTGCAGTTCATTTGTTATGTACCATAATAACTTCATTCCCATTTTCTATTCGTAATCATTATGATAGTGTTGAATCTGCTATTGCTTTAAAACTTTTGTCTGGAGGATGCAGTCTTGATATGTCAAAGAAACTCACACATTGCCTCGCACTGCTTCCAAAATCAAAAGGAGATGAAGAAAGCTGGTCTGTGATGATGCAGAAAATTTTGGTGTTAATAAATGATCAATTAAATTTAGCCTTTCATGGTCTAGAAGAAGAAACCCTGCGTAATGAGGTTACTAGGCTGTTGCTTTTGCCAGGAAAACATCCTCCACCACGATTAGGAGGCTATATATTGGCAGAAGAAGTTCGCAACAAGGCATCAAAAACGTCTGAGCAATCACTGATGTCTAATGCCTCTAGACTTATGTTTGGCTGCTGTCTGATGCTTAAAAATTCATATCCTGTTAAGGTAAATGTGCCTGTTCGCCTGTTATTGGCTTTTGTTGAGAGAATTCTGATGGTAAATGGCTCTTTGCCACAAATGTCATTGCCATTCATGACTGCCAAGCAGCAAGAGAACATTTGTTCGGAACTTCCAGTTTTGCACTTGAGTAGCTTGGAATTGCTTACGGCTATCATAAAGGCCATGGGCAGTCAACTATTACCACATGCTGCCTTTATTGTACGTATCATTACAAAGTACTTCAAGACATGTAAACTGCCAGAATTAAGGATTAAGGTCTATTCAGTCACAAGGAATTTATTCATAACCATGGGTGTTGGACTGGCTTTATACCTTGCACAGGAAGTGATCAACAATGCTTTTGCTGATTTAAGTAGTATTGAGCATAAGAATGGTGGCATATTAAATGGTTCTTATTCAAATGCCTCTGCTGGAACACTGCTACCGCCAAGTCATAGAAAAAGGAAGCACAGCAGTACAACTGGTTCTCTTCAAGAGCATGGTGAAGGTGGTTTGAGTGTGGAAGTTCCCAAGAATCGTCCATTGATTCCAATGTCTCTGAGAATTGCTGCACTTGAGACATTAGAGTCTCTTATTACTGTGGCTGGTGCTTTAAAATCTGAACCATGGAGATCAAAAGTTGATAGCCTTTTGATAGTCACAGCAATGGATTCTTTCAAGGAAGGATCAGTTGGTGAAGAAAGAAGCGTGTTTCAACAAAAGGAACCTGCTGCAACTACCACAGATTTGCAGCTTGCTGCATTGCGTGCTTTATTGGTATCCTTTCTTTCATTTGCTCGGGTACGACCTCCATATTTAGCCCAGGGTCTTGAACTTTTCCGTAAAGGGAGGCAACAAACTGGAACAAAACTAGCTGAGTTCTGTGCCCATGCTCTGTTAACCTTGGAAGTGCTTATACATCCTAGGGCACTTCCAATGGTAGATTATGCCTATGCAAATAACAGTTCTTTTGGTGAAGCTCACAGTAATCTCCAACATGAATATTTTGGCTGGAGCAACAGTACGCCATATGGTTTACCACAAGATCCTCCTGACTATGATGATGATCTGTGTGCTAGATGGCTTGAAAATGGCAATGAAGCCGATGAATCATTGGATAAAAATACAAAATACACCCAAGATCCTTCTGAAGCTTGCAGAGCTAGTGATCCTGAAGTGCTTTCCATGCATGTATCTTCTGGCACCAATATACAGGAGAGGACTGAGATGGTGGTGTCTGAGACTGCCACCTGTGCAAATGTTGAAATGAAAACGGTTGAGGATGAAATCAATTTCAAGTCGGATCAACCAGGAGAATCTGTGGTGCAATTTCAGGAAACTGTTTCTTGCACTACAAACATCCTGGTGGCTGAAACTTGCAGTGATGTAACTGATGATAAAGTGTCCGAGAAGATTGTTTCAGACAGCTCTGTTACTCGTAATGAAGCCAGTCATAAGGAATCAGGACAAGGAAGCTCGGCTAATAAAGACTTCAAATTTGCTTCTCTGAGTGGTAGTTTATGGCATAGAACCTCAGGCTGTAAAAATATTTTTGAGGAATTTGCTTTTCAATTGGATCATGACAAGGCACTGGCGGATGAAGATGATTTTCCTGATATTGTGGATGGAGACCCAGATTCTGATTCCGAATAA 2658 0.4229 MAAFDHFGNMYDVAFKPRLLQTLIRDHLPDEKRPFSNPSELSKVVSLIKTHSLLSESFADSTRPKLIEASKSALTSWLNRIYSLLSTTMPDKCLAGISLLGVTCEECSSERFLESYSVWFQKLLSFLQSPADSHLVRVAACASMSDLFARLGGYPKIKKDSSSCAVKVVQPTLKMLNDENSEAIWDAAVHLLCTIITSFPFSIRNHYDSVESAIALKLLSGGCSLDMSKKLTHCLALLPKSKGDEESWSVMMQKILVLINDQLNLAFHGLEEETLRNEVTRLLLLPGKHPPPRLGGYILAEEVRNKASKTSEQSLMSNASRLMFGCCLMLKNSYPVKVNVPVRLLLAFVERILMVNGSLPQMSLPFMTAKQQENICSELPVLHLSSLELLTAIIKAMGSQLLPHAAFIVRIITKYFKTCKLPELRIKVYSVTRNLFITMGVGLALYLAQEVINNAFADLSSIEHKNGGILNGSYSNASAGTLLPPSHRKRKHSSTTGSLQEHGEGGLSVEVPKNRPLIPMSLRIAALETLESLITVAGALKSEPWRSKVDSLLIVTAMDSFKEGSVGEERSVFQQKEPAATTTDLQLAALRALLVSFLSFARVRPPYLAQGLELFRKGRQQTGTKLAEFCAHALLTLEVLIHPRALPMVDYAYANNSSFGEAHSNLQHEYFGWSNSTPYGLPQDPPDYDDDLCARWLENGNEADESLDKNTKYTQDPSEACRASDPEVLSMHVSSGTNIQERTEMVVSETATCANVEMKTVEDEINFKSDQPGESVVQFQETVSCTTNILVAETCSDVTDDKVSEKIVSDSSVTRNEASHKESGQGSSANKDFKFASLSGSLWHRTSGCKNIFEEFAFQLDHDKALADEDDFPDIVDGDPDSDSE* 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0227 885 MobiDBLite consensus disorder prediction 481 511 - -
Gso16g0227 885 PANTHER PROLINE-, GLUTAMIC ACID- AND LEUCINE-RICH PROTEIN 1 9 883 - -
Gso16g0227 885 MobiDBLite consensus disorder prediction 808 830 - -
Gso16g0227 885 SUPERFAMILY ARM repeat 66 454 IPR016024 -
Gso16g0227 885 MobiDBLite consensus disorder prediction 809 830 - -
Gso16g0227 885 Pfam rRNA processing/ribosome biogenesis 23 220 IPR012583 -
Gso16g0227 885 Gene3D - 14 226 IPR011989 -
Gso16g0227 885 PANTHER PROLINE-, GLUTAMIC ACID- AND LEUCINE-RICH PROTEIN 1 9 883 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0227 Gso-Chr16 2678551 2687751 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0227 - - gmx:100803198 1669.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0521 7 5300751 5309958 Gso16g0227 16 2678551 2687751 GST