Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0426 ATGGTTGTGGCTGCGGGTGCTAAGTTCAATTTGAGAAGAGGGAATGGTTCTTCTCATAATGTTGTCAATAGCTATAGCAGTGATGGAGATCTCTGCAGAATTAACAAGAGTGGGTGTTTTTCGTCAGCGGCAGAGGTGGATAGAGACCCTTCTTGTGTTTCATTCACCACTTTCAACATTCTGGCTCCGATTTACAAACGGATTGATCCACAGAACCAAGGCCTACGAGAAAGTGACTTCAGATCATTCTGGTTGGACAGGAATAACAGGATTCTTGATTGCTTGCTTTATGAATCATCTTCTATTATGTGCCTTCAGGAGTTTTGGGTTGGAAATGAAGAACTTGTTAACATGTATGAGGAGAAACTTGGGGATGCTGGCTACCATCTCTTCAAGCTTCCTCGAACCAACAATCGCGGAGATGGCCTGCTGACTGCCATACGTAAAGAATGTCTAAGAGTTATGGATTATAAAGAGTTGCTTTTTAACGATTGTGGTGATCGTGTCGCTCAGTTGTTACATGTTCAGTCCGTTACCCCCTTGTTACAAAACCCAAAAGGCTGTGTTCCCCAAGAGTTTCTGATTGTGAACACCCACTTGTTATTTCCTCATGATTCAAGTCTGTGCGTAGTGAGATTGAATCAGGTTTACCAAATATTGCAATATGTGGAATTGTATCAGAGAGAAAACAGGCTCAAACCCATGCCTATTATACTCTGTGGTGACTGGAATGGAAGTAAGCGTGGACATGTTTACAAGTTCCTTAGGTCACAGGGGTTTGTATCATCATATGATATTGCTAATCGATACAGCGACAGTTATGCAGATGCTCACAAGTGGGTTAGTCACCGAAATCATAGGGGAAATATCTGTGGTGTTGACTTCATTTGGCTTTGCAATCCCAACCAAGCACGTAAACCTTTGAAGACAAGTTGGGCTGAAGCTGTATTTAGTATACTAAAATTCCAGTTACGAAAAGCATCAGTGTCTGAAGATGACGCATTTACCTTTCTGAAGGGTGACAACTATGCTGATTCTGTGACTTATTTTAGTTTTTCTGAAGCACTCCGTCAGGTGAAGTTAGTTGGTGTGCCTTATGGACTATGCTTTCAACAGTTGCAAGACCTATGGAATCAAGCAGATGTTGATGGAAATGGTGTCATCGACTTTGAAGAATTCAAGCAGAAAATATGGAATTCTACATGTCCAGAGCATGTGTTGGAAAATGTGAATGGGTGCATGGAGGATGGTAACACAGAACAGGAGCAAGAAGCCATTGGTTTTAAGGTGAAGAATGCAATGCTGTATCCGCGTGAAGTGGAGAAAGGACTATGGCCAGAAGATTATTCTCTTTCTGATCATGCTAGACTCACAGCTGTGTTTTCAACAGCAAGGATGCGATGTTCTGGCGTACAAAACTGA 1422 0.4205 MVVAAGAKFNLRRGNGSSHNVVNSYSSDGDLCRINKSGCFSSAAEVDRDPSCVSFTTFNILAPIYKRIDPQNQGLRESDFRSFWLDRNNRILDCLLYESSSIMCLQEFWVGNEELVNMYEEKLGDAGYHLFKLPRTNNRGDGLLTAIRKECLRVMDYKELLFNDCGDRVAQLLHVQSVTPLLQNPKGCVPQEFLIVNTHLLFPHDSSLCVVRLNQVYQILQYVELYQRENRLKPMPIILCGDWNGSKRGHVYKFLRSQGFVSSYDIANRYSDSYADAHKWVSHRNHRGNICGVDFIWLCNPNQARKPLKTSWAEAVFSILKFQLRKASVSEDDAFTFLKGDNYADSVTYFSFSEALRQVKLVGVPYGLCFQQLQDLWNQADVDGNGVIDFEEFKQKIWNSTCPEHVLENVNGCMEDGNTEQEQEAIGFKVKNAMLYPREVEKGLWPEDYSLSDHARLTAVFSTARMRCSGVQN* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0426 473 ProSitePatterns EF-hand calcium-binding domain. 381 393 IPR018247 -
Gso7g0426 473 Gene3D Endonuclease/exonuclease/phosphatase 39 469 IPR036691 -
Gso7g0426 473 Pfam Endonuclease/Exonuclease/phosphatase family 84 300 IPR005135 GO:0003824
Gso7g0426 473 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 17 469 - -
Gso7g0426 473 PANTHER ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY PROTEIN 17 469 - -
Gso7g0426 473 SUPERFAMILY EF-hand 350 398 IPR011992 -
Gso7g0426 473 ProSiteProfiles EF-hand calcium-binding domain profile. 368 403 IPR002048 GO:0005509
Gso7g0426 473 SUPERFAMILY DNase I-like 46 271 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0426 Gso-Chr7 4002783 4006957 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0426 118 469 EF-hand Containing Proteins AT1G02270 63.920 1.07e-168 477
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0426 - - gmx:100777138 982.245
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0426 7 4002783 4006957 Gso7g0426 7 4002783 4006957 ECH
Gso7g0426 7 4002783 4006957 Gso16g0135 16 1425645 1429894 GST