Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0409 ATGAGAGAGCCAAGAGATGGAGCCAGGACCGATAGTTCCAAGCCCTCCAAAGCCGCACCACCGCCTCAGTCCTTCCCTCTCATTCTCGACATCGACGATTTCAAGGGAGATTTCTCGTTCGACGCGTTGTTCGGGAACCTCGTGAACGACCTTCTCCCGTCGTACAAATTGGAGGAATCGGAATCTGATGGCGGAGATGCTCTGCCGAACGGGCATCTCCGCGTGCCGTCCGATGCGTCCAAGTACTCGCAGGGGATTGTGAGTCCGTTGTTTCCTGAGGTTGAAAAGCTCCTGTCGTTGTTCAAGGATTCTTGTAAGGAGCTGCTTGAGCTTCGTAAACAGATTGATGGGAGACTCTACAATCTTAAGAAAGATGTTTCGGTTCAAGACTCTAAGCATCGGAAGACACTTGCTGAGCTAGAGAAAGGTGTGGATGGATTGTTTGACAGCTTTGCAAGGTTGGATTCACGAATTTCAAGTGTTGGTCAGACAGCAGCAAAGATAGGTGATCATCTCCAGAGTGCAGATGCTCAGCGAGAAACTGCCAGTCAAACAATTGAATTGATAAAATACTTAATGGAATTCAATAGCAGTCCAGGCGACCTGATGGAGCTTTCACCTCTTTTTTCTGATGATAGCCGTGTTGCTGAGGCTGCTTCGATTGCCCAGAAATTACGGTCATTTGCTGAAGAAGATATCGGAAGACATGGAATACCTGTCCCATCAGCTATGGGAAATGCAACTGCTAGCAGAGGATTAGAAGTGGCAGTTGCTAATTTACAGGACTACTGCAATGAACTGGAGAATAGATTGCTTTCTCGGTTTGACGCAGCATCACAGAAAAGAGAATTGACCACAATGGCAGAATGTGCCAAAATTTTGTCTCAGTTTAACAGGGGTACAAGTGCCATGCAACATTATGTGGCTACTCGTCCAATGTTCATTGATGTGGAAATAATGAATGCAGACACTAAGCTGGTTCTTGGTGACCAGGCTGCCCAAGCTAGTCCAAGTAATGTTGCTCGTGGGCTTTCCTCCTTGTACAAAGAAATCACAGATACTGTTCGTAAAGAGGCTGCAACAATCACGGCTGTATTCCCTTCACCAAGTGAAGTTATGTCAATTTTAGTTCAGAGAGTTTTAGAGCAGAGAATCACTGCCCTTTTGGACAAACTGTTAGAGAAACCATCTCTTGTCAATTTACCTTCCATGGAGGAAGGTGGGCTCCTATTATATCTTCGAATGCTGGCAGTGGCGTATGAAAAGACCCAAGAACTAGCAAGAGATCTACAAGCTGTAGGATGTGGTGACTTGGATGTTGAGGGTCTAACAGAGTCCCTATTTTCAAGTCACAAGGATGAATACCCTGAATATGAGCAGGCATCTCTTAGGCAATTATATAAAGTGAAGATGGAAGAATTGCGAGCTGAAAGCCAGCAGATTTCGGATTCATCTGGGTCAATTGGACGCTCAAAAGGAGCTTCAGTAGTTTCTTCTCAACAGCAAATATCTGTTACTGTTGTAACTGAGTTTGTGCGTTGGAATGAAGAAGCAATCTCAAGATGCAATCTCTTTGCTTCCCAGCCTGCTACACTTGCAACCCATGTTAAAGCAGTGTTTACTTGCCTGCTAGACCAAGTTAGTCAATATATAGCAGATGGGCTTGAACGGGCGAGAGACAGCCTGACTGAAGCAGCTAATTTGAGGGAAAGATTTGTGCTGGGTACAAGTGTTACCCGTAGAGTGGCTGCTGCAGCTGCATCTGCTGCAGAGGCGGCAGCAGCTGCTGGTGAAAGTAGTTTCAGATCTTTTATGATTGCTGTACAACGTTCTGGAAGCAGTGTAGCTATTATTCAACAATACTTTGCTAATTCTATATCTCGGCTTTTGCTCCCCGTTGATGGTGCACATGCTGCTGCTTGTGAGGAAATGGCTACAGCAATGTCAAGTGCAGAGGCTGCTGCTTACAAAGGACTACAACAGTGCATTGAAACTGTCATGGCTGAGGTGGAGCGGTTGCTTTCAGCTGAACAAAAGGCTACAGATTATCGATCACCTGATGATGGAATGGCTCCTGACCACCGGGCAACCAGTGCCTGCACAAGAGTTGTTGCTTATCTTTCTCGTGTGCTGGAGTCTGCATTTACTGCTTTAGAAGGCCTTAACAAACAAGCATTCCTGACTGAGTTGGGAAATCGCTTGCACAAGGTGCTACTAAACCATTGGCAGAAGTATACTTTTAATCCAAGTGGAGGGTTGCGACTGAAGCGTGACATTACTGAATATGGAGAATTTCTGCGTAGTTTCAATGCTCCTTCTGTTGATGAAAAGTTTGAATTGTTGGGCATAATGGCCAATGTATTTATAGTTGCTCCTGAGAGCCTTTCAACTTTGTTTGAGGGCACACCCAGCATACGGAAAGATGCGCAAAGATTTATTCAACTTCGGGATGACTACAAGGCTGCCAAACTTGCGTCCAAACTAAGTTCCTTGTGGTCTTAA 2502 0.4544 MREPRDGARTDSSKPSKAAPPPQSFPLILDIDDFKGDFSFDALFGNLVNDLLPSYKLEESESDGGDALPNGHLRVPSDASKYSQGIVSPLFPEVEKLLSLFKDSCKELLELRKQIDGRLYNLKKDVSVQDSKHRKTLAELEKGVDGLFDSFARLDSRISSVGQTAAKIGDHLQSADAQRETASQTIELIKYLMEFNSSPGDLMELSPLFSDDSRVAEAASIAQKLRSFAEEDIGRHGIPVPSAMGNATASRGLEVAVANLQDYCNELENRLLSRFDAASQKRELTTMAECAKILSQFNRGTSAMQHYVATRPMFIDVEIMNADTKLVLGDQAAQASPSNVARGLSSLYKEITDTVRKEAATITAVFPSPSEVMSILVQRVLEQRITALLDKLLEKPSLVNLPSMEEGGLLLYLRMLAVAYEKTQELARDLQAVGCGDLDVEGLTESLFSSHKDEYPEYEQASLRQLYKVKMEELRAESQQISDSSGSIGRSKGASVVSSQQQISVTVVTEFVRWNEEAISRCNLFASQPATLATHVKAVFTCLLDQVSQYIADGLERARDSLTEAANLRERFVLGTSVTRRVAAAAASAAEAAAAAGESSFRSFMIAVQRSGSSVAIIQQYFANSISRLLLPVDGAHAAACEEMATAMSSAEAAAYKGLQQCIETVMAEVERLLSAEQKATDYRSPDDGMAPDHRATSACTRVVAYLSRVLESAFTALEGLNKQAFLTELGNRLHKVLLNHWQKYTFNPSGGLRLKRDITEYGEFLRSFNAPSVDEKFELLGIMANVFIVAPESLSTLFEGTPSIRKDAQRFIQLRDDYKAAKLASKLSSLWS* 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0409 833 Coils Coil 250 270 - -
Gso7g0409 833 MobiDBLite consensus disorder prediction 1 24 - -
Gso7g0409 833 PANTHER SEC10 26 832 IPR009976 GO:0005737|GO:0006887
Gso7g0409 833 Pfam Exocyst complex component Sec10 145 482 IPR009976 GO:0005737|GO:0006887
Gso7g0409 833 Pfam Exocyst complex component Sec10 496 827 IPR009976 GO:0005737|GO:0006887
Gso7g0409 833 PANTHER EXOCYST COMPLEX COMPONENT SEC10-LIKE PROTEIN-RELATED 26 832 - -
Gso7g0409 833 Gene3D - 666 827 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0409 Gso-Chr7 3856222 3867860 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0409 K19984 - gmx:100820430 1507.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0409 7 3856222 3867860 Gso16g0115 16 1248996 1260315 GST