Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0115 ATGAGAGAGCCCAGAGATGGAGCCAATAACAAGCCCTCTAAAGCCGCCGCCGCCGCCGCCGCATCACCGCCTCAGTCCTTCCCTCTCATTCTCGACGTCGACGATTTCAAGGGAGACTTCTCGTTCGACGCGTTGTTCGGGAACCTCGTCAACGAGCTTCTTCCGACGTTCAAATTGGAGGAATCTGAATCGGACGGCGGAGATGCTCTCCCGAACGGCCATCTCCGCGTGCCATCCACCGATGGGTCCAAGTACTCGCAGGGGATTGTGAGTCCGTTGTTTCCTGAGGTCGAGAAGCTCCTGTCGTTGTTCAAGGATTCTTGTAAGGAGCTGCTTGAGCTTCGTAAACAGATTGATGGGAGACTCTACAATCTCAAGAAAGATGTTTCGGTTCAAGACTCTAAGCATCGGAAGACACTTGCTGAGCTAGAGAAAGGTGTGGATGGATTGTTTGACAGCTTTGCGAGGTTGGATTCACGAATTTCAAGTGTTGGTCAGACAGCAGCAAAGATAGGTGATCATCTCCAGAGTGCAGATGCTCAGCGAGAAACTGCCAGTCAAACAATTGAGTTGATAAAATACTTAATGGAATTCAATAGCAGCCCAGGCGACCTGATGGAGCTTTCACCTCTTTTTTCTGATGATAGCCGTGTTGCTGATGCTGCTTCGATTGCCCAGAAATTACGGTCATTTGCTGAAGAAGATATAGGAAGACATGGAATACCTGTCCCATCAGCTATGGGAAATGCAACTGCTAGCAGAGGATTAGAAGTAGCAGTTGCTAATTTACAGGACTACTGCAATGAACTGGAGAATAGATTGCTTTCTCGGTTTGATGCAGCATCACAGAAAAGAGAATTGACCACAATGGCAGAATGTGCCAAAATTTTGTCTCAGTTTAACAGGGGTACAAGTGCCATGCAACATTATGTGGCAACACGTCCAATGTTTATTGATGTGGAAATAATGAATGCAGACACTAAGCTGGTTCTTGGTGACCAGGCTGCCCAAGCTAGTCCTAGTAATGTTGCTCGTGGGCTTTCCTCCTTGTACAAAGAAATCACAGATACTGTTCGTAAGGAAGCTGCAACAATCACGGCCGTATTCCCTTCACCAAGTGAAGTTATGTCAATTTTAGTTCAGAGAGTTTTAGAGCAGCGAATCACTGCCCTTTTGGACAAACTGTTAGAGAAACCATCTCTTGTCAATTTACCTTCCGTGGAGGAAGGTGGGCTCCTATTATATCTTCGAATGCTGGCAGTGGCGTATGAAAAGACCCAAGAGCTAGCAAGAGATCTACAAGCTGTAGGATGTGGTGACTTGGATGTTGAGGGTCTAACAGAGTCCCTATTTTCAAGTCACAAGGATGAATACCCTGAATATGAGCAGGCATCTCTTAGGCAATTATATAAAGTGAAGATGGAAGAACTGCGAGCTGAAAGCCAGCAGATTTCTGATGCATCTGGGTCAATTGGACGCTCAAAAGGAGCTTCAGTAGTTTCTTCTCAACAGCAAATATCTGTTACTGTTGTAACAGAGTTTGTGCGTTGGAATGAAGAAGCAATCTCAAGATGCAATCTCTTTGCTTCCCAGCCTGCTACACTTGCAACCCATGTTAAAGCAGTGTTTACTTGCCTGCTAGACCAAGTTAGTCAATATATAGCTGATGGGCTTGAACGGGCAAGAGACAGCCTGACTGAAGCAGCTAATTTGAGGGAAAGATTTGTGTTGGGTACAAGTGTTACCCGTAGAGTGGCTGCTGCAGCTGCATCTGCTGCAGAGGCGGCGGCAGCTGCTGGTGAAAGTAGTTTCAGATCTTTCATGATTGCTGTGCAACGTTCTGGAAGCAGTGTAGCTATTATTCAACAATACTTTGCTAATTCTATATCTCGGCTTTTGCTCCCCGTTGATGGTGCACATGCTGCTGCTTGTGAGGAAATGGCTACAGCAATGTCAAGTGCAGAGGCTGCTGCTTATAAAGGACTACAACAGTGCATTGAAACTGTCATGGCTGAGGTGGAGCGGTTGCTTTCAGCTGAACAAAAGGCTACAGATTATCGATCACCTGATGATGGAATGGCTCCTGACCACCGGGCAACCAGTGCCTGCACAAGAGTTGTTGCTTATCTTTCTCGTGTGCTGGAGTCTGCATTTACTGCTTTAGAAGGCCTTAACAAACAAGCATTCCTGACTGAGTTGGGAAATCGCTTGCACAAGGTGCTACTAAACCATTGGCAGAAGTATACTTTTAATCCAAGTGGGGGGTTGCGACTGAAGCGTGACATTACTGAATATGGAGAATTTCTGCGTAGTTTCAATGCTCCGTCTGTTGATGAAAAGTTTGAATTATTGGGCATAATGGCCAATGTATTTATTGTTGCTCCTGAGAGCCTTTCAACTTTGTTTGAGGGCACACCCAGCATACGGAAAGATGCACAAAGATTTATTCAACTTCGGGATGACTACAAGGCTGCCAAACTTGCGTCCAAACTAAGTTCCTTGTGGTCTTAA 2511 0.4592 MREPRDGANNKPSKAAAAAAASPPQSFPLILDVDDFKGDFSFDALFGNLVNELLPTFKLEESESDGGDALPNGHLRVPSTDGSKYSQGIVSPLFPEVEKLLSLFKDSCKELLELRKQIDGRLYNLKKDVSVQDSKHRKTLAELEKGVDGLFDSFARLDSRISSVGQTAAKIGDHLQSADAQRETASQTIELIKYLMEFNSSPGDLMELSPLFSDDSRVADAASIAQKLRSFAEEDIGRHGIPVPSAMGNATASRGLEVAVANLQDYCNELENRLLSRFDAASQKRELTTMAECAKILSQFNRGTSAMQHYVATRPMFIDVEIMNADTKLVLGDQAAQASPSNVARGLSSLYKEITDTVRKEAATITAVFPSPSEVMSILVQRVLEQRITALLDKLLEKPSLVNLPSVEEGGLLLYLRMLAVAYEKTQELARDLQAVGCGDLDVEGLTESLFSSHKDEYPEYEQASLRQLYKVKMEELRAESQQISDASGSIGRSKGASVVSSQQQISVTVVTEFVRWNEEAISRCNLFASQPATLATHVKAVFTCLLDQVSQYIADGLERARDSLTEAANLRERFVLGTSVTRRVAAAAASAAEAAAAAGESSFRSFMIAVQRSGSSVAIIQQYFANSISRLLLPVDGAHAAACEEMATAMSSAEAAAYKGLQQCIETVMAEVERLLSAEQKATDYRSPDDGMAPDHRATSACTRVVAYLSRVLESAFTALEGLNKQAFLTELGNRLHKVLLNHWQKYTFNPSGGLRLKRDITEYGEFLRSFNAPSVDEKFELLGIMANVFIVAPESLSTLFEGTPSIRKDAQRFIQLRDDYKAAKLASKLSSLWS* 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0115 836 Coils Coil 253 273 - -
Gso16g0115 836 Gene3D - 669 830 - -
Gso16g0115 836 PANTHER EXOCYST COMPLEX COMPONENT SEC10-LIKE PROTEIN-RELATED 23 835 - -
Gso16g0115 836 Pfam Exocyst complex component Sec10 148 484 IPR009976 GO:0005737|GO:0006887
Gso16g0115 836 Pfam Exocyst complex component Sec10 500 830 IPR009976 GO:0005737|GO:0006887
Gso16g0115 836 MobiDBLite consensus disorder prediction 1 23 - -
Gso16g0115 836 PANTHER SEC10 23 835 IPR009976 GO:0005737|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0115 Gso-Chr16 1248996 1260315 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0115 K19984 - gmx:100788897 1503.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0409 7 3856222 3867860 Gso16g0115 16 1248996 1260315 GST