Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0406 ATGCGGAAATATGCTGCAGACAGATTCAGGCACCTTTTCAACCGTTCACTCCTTCTTCTGCGTCACCGTCACCATCATAATCACCATCCCTTTCCTTATTCTTCTTCTGTTTCATCCCTCTCCCCATTTTCTCGCTCTCGTTTCTTGTCCTCTACTCCTTTCTCCATGGCTTCTGATTCCCCTTTCCCTGTCACCGCTCAAAACATCAACCCCAAGGTTCTGAAATGTGAGTATGCTGTTAGAGGAGAGGTTGTCACACTTGCCCAGAATTTGCAAAAGGATTTACAGGCCAATCCAGGTTCTCACCCATTTGATGAGATACTTTACTGCAACATTGGAAATCCTCAGTCTCTGGGCCAGCAGCCAATAACTTTTTTCCGAGAGGTTCTTGCATTATGTGACCATCCAGCTATATTGGACAAAAGTGAAACACAGGGTTTGTTCAGTACTGACGCAATACAGCGAGCATGGCAGATTGTGGATCAGATTCCTGGGAGAGCAACTGGTGCCTATAGCCATAGTCAGGGTGTCAAGGGCTTGCGTGATACAATAGCTGCTGGAATTGAAGAGCGTGATGGTTTTCCTGCCAATCCCGATGACATTTTCATGACTGATGGTGCAAGCCCTGCTGTCCATAATATGATGCAATTACTCATTAGATCAGAAAATGACGGTATTCTGTGTCCCATTCCACAGTACCCTCTGTACTCAGCCTCAATTGCCCTCCATGGTGGCTGCCTGGTACCTTATTATCTAGATGAAGCAACAGGCTGGGGGTTGGAAATACCTGAACTCAAGAAGCAATTGGAGGCTGCCAAGTCTAAGGGCATCAATGTTAGGGCTTTAGTTGTTATAAATCCTGGCAATCCAACGGGGCAGGTTCTTGGTGAGGCAAATCAGCGAGATATAGTAGAGTTTTGCAAGCAAGAAGGTTTGGTTCTTTTAGCTGATGAGGTATATCAAGAAAATGTTTATGTTCCTGAGAAGAAATTTCACTCTTTCAAGAAGGTATCTCGGTCCATGGGATATGGTGAGAATGATATCACCTTAGTATCTTTTCAATCAGTCTCCAAAGGCTATCACGGGGAGTGTGGGAAACGAGGAGGTTATATGGAGGTGACTGGGTTTTCTGCAGAAGTGAGGGAACAAATATATAAAGTGGCATCTGTCAACCTTTGCTCTAATATCTCTGGTCAAATTCTTGCAAGCTTGGTCATGAGTCCACCCAAGGTTGGAGATGAGTCCTATGACTCATTCATGGCTGAGAAGGAGAATATTTTGGCGTCCCTTGCCAGGCGTGCAAAGACACTAGAAGATGCATTCAACAAATTAGAGGGTGTAACATGCAACAAAGCAGAAGGGGCAATGTACCTGTTCCCCCAAATTCGCCTGTCCGAAAAGGCTATCAAAGCTGCAGAGGCTGCAAATGCAACACCTGATAACTTCTATTGCAAACGCTTGCTTAATGCCACAGGAGTAGTTGTTGTTCCTGGTTCTGGTTTTGGACAGGTTCCTGGCACATGGCATTTTAGGTGCACCATATTGCCTCCAGAAGAAAAGATTCCGGCCATCGTCACCCGCTTGACTGAGTTCCATGAAAAATTCATGGATGAGTTCCGTGACTAA 1626 0.4533 MRKYAADRFRHLFNRSLLLLRHRHHHNHHPFPYSSSVSSLSPFSRSRFLSSTPFSMASDSPFPVTAQNINPKVLKCEYAVRGEVVTLAQNLQKDLQANPGSHPFDEILYCNIGNPQSLGQQPITFFREVLALCDHPAILDKSETQGLFSTDAIQRAWQIVDQIPGRATGAYSHSQGVKGLRDTIAAGIEERDGFPANPDDIFMTDGASPAVHNMMQLLIRSENDGILCPIPQYPLYSASIALHGGCLVPYYLDEATGWGLEIPELKKQLEAAKSKGINVRALVVINPGNPTGQVLGEANQRDIVEFCKQEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGENDITLVSFQSVSKGYHGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYDSFMAEKENILASLARRAKTLEDAFNKLEGVTCNKAEGAMYLFPQIRLSEKAIKAAEAANATPDNFYCKRLLNATGVVVVPGSGFGQVPGTWHFRCTILPPEEKIPAIVTRLTEFHEKFMDEFRD* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0406 541 Gene3D Aspartate Aminotransferase, domain 1 67 539 IPR015422 GO:0003824
Gso7g0406 541 PANTHER ALANINE AMINOTRANSFERASE 2 56 540 - -
Gso7g0406 541 CDD AAT_like 156 530 - -
Gso7g0406 541 Gene3D - 169 415 IPR015421 GO:0003824
Gso7g0406 541 Gene3D - 118 168 - -
Gso7g0406 541 Coils Coil 420 447 - -
Gso7g0406 541 Pfam Aminotransferase class I and II 165 523 IPR004839 GO:0009058|GO:0030170
Gso7g0406 541 PANTHER ALANINE AMINOTRANSFERASE 56 540 IPR045088 GO:0008483
Gso7g0406 541 SUPERFAMILY PLP-dependent transferases 67 535 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0406 Gso-Chr7 3822167 3828177 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0406 K00814 - gmx:100776235 1021.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0406 7 3822167 3828177 Gso7g0406 7 3822167 3828177 ECH
Gso7g0406 7 3822167 3828177 Gso16g0112 16 1214798 1220771 GST