Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0112 ATGCGGAAATCTGCTGCAGACAGATTCAGGCACCTTTTCAACCGTTCACTCATTCTTCTGCGCCACCGTCACCATCACCATCCCTTTCCTTCTTCTTCTTCTCTCTCCCCATTTTCTCGCTCTCGTTTCTTCTCCTCTACGCCGTTCTCCATGGCTTCTGATTCCCCTTTTCCTGTCACCGCTCAAAACATCAACCCCAAGGTTCTGAAATGTGAGTATGCTGTTAGAGGAGAGGTTGTCACACTTGCCCAGAATTTGCAAAAGGATTTACAGGCCAATCCAGGCTCTCACCCATTTGATGAGATACTTTACTGCAACATTGGAAATCCTCAGTCTCTTGGCCAGCAGCCAATAACTTTTTTCCGAGAGGTTCTTGCATTATGTGACCATCCAGCTATATTAGACAAAAGTGAAACACAGGGTTTGTTCAGTACCGACGCAATACAGCGAGCTTGGCAGATTGTGGATCAGATTCCTGGGAGAGCAACTGGTGCCTATAGCCATAGTCAGGGTGTCAAGGGCTTGCGTGATACAATAGCTGCTGGAATTGAAGAGCGTGATGGTTTTCCTGCCAATCCTGATGACATTTTCATGACAGATGGTGCAAGCCCTGCAGTCCATAATATGATGCAATTACTCATTAGATCAGAAAATGATGGTATTCTGTGTCCCATTCCACAGTACCCTCTGTACTCAGCCTCAATTGACCTCCATGGTGGCTTCCTGGTACCTTATTATCTAGATGAAGCAACAGGTTGGGGGTTGGAAATACCTGAACTCAAGAAGCAATTGGAGGCTGCCAAGTCTAAGGGCATCAATGTTAGGGCTTTAGTTGTTATAAATCCTGGCAATCCAACGGGGCAGGTTCTTGGTGAGGAAAATCAGCGGGATATAGTAGAATTTTGCAAGCAAGAAGGTTTGGTTCTTTTAGCTGATGAGGTATATCAAGAAAACGTTTATGTTCCTGAGAAGAAATTTCACTCTTTCAAGAAGGTATCTCGGTCCATGGGATATGGTGAGAATGATATCACCTTAGTATCTTTTCAATCAGTCTCCAAAGGCTACCACGGGGAGTGTGGGAAACGAGGAGGTTATATGGAGGTGACTGGGTTTTCTGCAGAAGTGAGGGAACAAATATATAAAGTGGCATCTGTCAACCTTTGCTCTAATATCTCTGGTCAAATTCTTGCTAGCTTAGTCATGAGTCCTCCTAAGGTTGGAGATGAGTCCTATGAGTCATTCAATGCTGAGAAGGAGAATATTTTGGAGTCCCTTGCTAGGCGTGCCAAGACACTAGAAGATGCATTCAACAAATTAGAGGGTGTAACATGCAACAAAGCAGAAGGGGCAATGTATCTGTTCCCCCAAATTCGCCTGTCCCAAAAGGCTATCAAAGCTGCAGGAGATGCAAATACAGCACCTGATAATTTCTATTGCAAACGCTTGCTTAACGCGACAGGAGTAGTTGTTGTTCCTGGTTCTGGTTTTGGACAGGTTCCTGGCACATGGCATTTTAGGTGCACCATATTGCCTCCAGAAGAAAAGATTCCGGCCATTGTCACCCGCTTGACAGAGTTCCATGAAAAATTCATGGATGAGTTCCGTGACTAA 1611 0.4494 MRKSAADRFRHLFNRSLILLRHRHHHHPFPSSSSLSPFSRSRFFSSTPFSMASDSPFPVTAQNINPKVLKCEYAVRGEVVTLAQNLQKDLQANPGSHPFDEILYCNIGNPQSLGQQPITFFREVLALCDHPAILDKSETQGLFSTDAIQRAWQIVDQIPGRATGAYSHSQGVKGLRDTIAAGIEERDGFPANPDDIFMTDGASPAVHNMMQLLIRSENDGILCPIPQYPLYSASIDLHGGFLVPYYLDEATGWGLEIPELKKQLEAAKSKGINVRALVVINPGNPTGQVLGEENQRDIVEFCKQEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGENDITLVSFQSVSKGYHGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESFNAEKENILESLARRAKTLEDAFNKLEGVTCNKAEGAMYLFPQIRLSQKAIKAAGDANTAPDNFYCKRLLNATGVVVVPGSGFGQVPGTWHFRCTILPPEEKIPAIVTRLTEFHEKFMDEFRD* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0112 536 PANTHER ALANINE AMINOTRANSFERASE 51 535 IPR045088 GO:0008483
Gso16g0112 536 SUPERFAMILY PLP-dependent transferases 62 530 IPR015424 -
Gso16g0112 536 Gene3D Aspartate Aminotransferase, domain 1 62 534 IPR015422 GO:0003824
Gso16g0112 536 PANTHER ALANINE AMINOTRANSFERASE 2 51 535 - -
Gso16g0112 536 CDD AAT_like 151 525 - -
Gso16g0112 536 Gene3D - 113 163 - -
Gso16g0112 536 Coils Coil 415 442 - -
Gso16g0112 536 Gene3D - 164 410 IPR015421 GO:0003824
Gso16g0112 536 Pfam Aminotransferase class I and II 160 518 IPR004839 GO:0009058|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0112 Gso-Chr16 1214798 1220771 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0112 K00814 - gmx:100127413 1023.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0406 7 3822167 3828177 Gso16g0112 16 1214798 1220771 GST