Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0351 ATGGCCCTTACAAAACAAATCTTGGGTTCTTCATTGCTAGAGAGGTCCATGTTTGTTCCTTCTTCTTCCCCTTCATCACTTCTCAACCAAACTCGGTTCTTAGTTCCTTTGGAGAACAAGAGAGTTGTGAGGGTGAAGAGAGCTGCAAAGTTTCCTGTGGCAGCTATAAGTGAGGATTTGATGAAGGGTTCTTCTTCTTCTCCTTCATCATCATCATCTTCATCCTCTTCTTCTTCTTCTTCTTCTGTGTCCACAGAAAAACCAGTGAAATTCAAGGTTAGAGCTGTGATCACAGTGAGGAACAAGATCAAAGAGGATTTCAAAGAGACCATCGTGAAGCATATTGATGCTCTTACTGACAGGATTGGAAGGAATGTTGTCCTTGAACTTGTTAGCACTGAGATTGATCCAAAGACCAAATCTGCAAAGAAAAGTAATGAAGCAGTGCTGAAGGATTGGTCAAAGAAGTCCAATCTTAAGGCAGAGAGAGTTAATTACACGGCTGAATTCATAATTGACTCTAGTTTTGGGGAGCCAGGAGCTATTACTGTGACAAACAAACACCAGAAAGAGTTCTTCTTGGATAGCATAACCATTGAAGGATTTGCAAGTGGACCAGTTCATTTCCCCTGCAATTCATGGGTACAATCAAGAAAAGATCTTCCTGGAAAGAGGATTTTCTTTTCCAATAAGCCATATTTACCCGGGGATACACCTGCTGGGCTTAGATTATTGAGGGAGAAAGAGCTGAGAAATCTCAGAGGTGATGGCAAAGGAGTTAGAAACTTATCTGACAGAATATATGACTATGATATATACAATGATTTGGGAAATCCAGATAAAGGAATTGAACTTGCCAGGCCAAATCTTGGAGGATCAGATATGTATCCATACCCAAGACGGTGTCGTACTGGCCGCGAACCAAGTGATACAGATATGTACGCAGAGAGTCGTGTGGAGAAGCCATTGCCTATGTATGTGCCAAGAGATGAACGTTTTGAGGAGTCTAAGCAGAACACATTCACTGTGAAGAGGCTCAAGGCAGTGCTGCATAACTTGATCCCAGGTCTTAAGGCTAGCCTTTCTTCTAGCAACCAAGACTTCAATGAATTCTCAGATGTTGATGGCCTTTACAGTGAAGGGTTGCTCATAAAGTTGGGGTGGGGGTTGCAAGATGACGTGTTGAAGAAAATTCCATTTGTCAGCAAAATCCAAGAGTCCAGCCAGGGTCTTCTTAAGTATGACACTCCTAAGATCATTTCCAAGGACAAATTTGCGTGGTTGCGAGATGACGAATTTGCCCGCCAAGCAATAGCAGGAGTTAACCCTGTTAACATTGAGAAGCTTCAAGTTTTCCCACCAGTTAGCAAACTAGACCCAGAAATTTATGGCCCCCAAGAGTCTGCTCTTAAAGAAGAACATATTTTGAATCAACTCAATGGCATGACTGTCCAAGAGGCAATAAACGAAAATAAGCTGTTTATGATTGATTATCATGATATATATCTACCTTTCTTAGAAGGGATCAATGCCCTTGATGGTAGGAAATCATATGCCACACGCACCATCTTTTTCTTGACACCACGTGGCACTCTCAAGCCTGTGGCTATAGAACTTAGCCTCCCTCATGCTGGACCTAATTCCCGGTCAAAGCGCGTGGTTACACCTCCTGTTGATGCTACTACTAATTGGATGTGGCAGCTTGCCAAGGCCCATGTTTGCTCCAATGATGCTGGGGTGCACCAACTTGTTAACCATTGGTTACGTACACATGCCAACTTGGAACCATTTATATTGGCGGCTCATAGGCAATTAAGTGCTATGCATCCAATTTTCAAGTTGTTGGACCCCCACATGAGGTACACCTTGGAGATCAATGCCTTGGCTAGACAGAGTTTGATCAATGCTGATGGAATCATTGAAAATTGCTTTACTCCTGGTCGCTATGCCATGGAGATTAGTTCTGCTGCCTACAAGAACTTTTGGCGCTTTGACATGGATAGCCTCCCTGCAGATCTCATCCGCAGGGGAATGGCCGTACCTGACCCAACACAGCCACATGGTCTAAAGCTCATATTGGAAGACTACCCTTATGCAGCTGATGGAATACTAATCTGGTCTGCAATAGAAGACTGGGTTCGAACCTATGTGAACCATTACTACCCTCACTCAAGCCTTATATGCAATGACAAAGAGTTACAATCTTGGTACTCTGAGTCAATCAATGTAGGCCATGCTGATCTCAGGCATGAAAGTTGGTGGCCAACATTGAACAATAGTGAGGATCTTGTGTCCATTCTTTCCACATTGATTTGGAATGCATCTGCACAACATGCTGCTCTCAACTTTGGCCAGTACCCTTATGGTGGCTATGTGCCTAATCGTCCACCACTGATGAGAAGGTTAATACCAGAAGAGGGTGATCCAGAATATGCAAGTTTCCATGCTGACCCTCAGAAGTATTTTCTGAATGCATTGCCTAGCTTGCTGCAAGCCACAAAGTTCATGGCTGTGGTTGACACACTCTCCACTCACTCACCTGATGAGGAGTACTTGGGGGAGAGGCAACAACCTTCAATTTGGTCTGGAGACGCCGAGATCGTCGAGGCGTTCTACGATTTCTCCGCCAAGGTTCGACAGATAGAGAAGGTCATTGATAGCAGGAACCTTGATCGGACTCTAAGGAACCGTTGTGGTGCAGGGGTGTTGCCATATGAGTTGCTTGCTCCTAGCTCTGAACCTGGCGTTACATGCAGAGGGGTGCCCAATAGTGTGTCCACATAA 2784 0.4429 MALTKQILGSSLLERSMFVPSSSPSSLLNQTRFLVPLENKRVVRVKRAAKFPVAAISEDLMKGSSSSPSSSSSSSSSSSSSSVSTEKPVKFKVRAVITVRNKIKEDFKETIVKHIDALTDRIGRNVVLELVSTEIDPKTKSAKKSNEAVLKDWSKKSNLKAERVNYTAEFIIDSSFGEPGAITVTNKHQKEFFLDSITIEGFASGPVHFPCNSWVQSRKDLPGKRIFFSNKPYLPGDTPAGLRLLREKELRNLRGDGKGVRNLSDRIYDYDIYNDLGNPDKGIELARPNLGGSDMYPYPRRCRTGREPSDTDMYAESRVEKPLPMYVPRDERFEESKQNTFTVKRLKAVLHNLIPGLKASLSSSNQDFNEFSDVDGLYSEGLLIKLGWGLQDDVLKKIPFVSKIQESSQGLLKYDTPKIISKDKFAWLRDDEFARQAIAGVNPVNIEKLQVFPPVSKLDPEIYGPQESALKEEHILNQLNGMTVQEAINENKLFMIDYHDIYLPFLEGINALDGRKSYATRTIFFLTPRGTLKPVAIELSLPHAGPNSRSKRVVTPPVDATTNWMWQLAKAHVCSNDAGVHQLVNHWLRTHANLEPFILAAHRQLSAMHPIFKLLDPHMRYTLEINALARQSLINADGIIENCFTPGRYAMEISSAAYKNFWRFDMDSLPADLIRRGMAVPDPTQPHGLKLILEDYPYAADGILIWSAIEDWVRTYVNHYYPHSSLICNDKELQSWYSESINVGHADLRHESWWPTLNNSEDLVSILSTLIWNASAQHAALNFGQYPYGGYVPNRPPLMRRLIPEEGDPEYASFHADPQKYFLNALPSLLQATKFMAVVDTLSTHSPDEEYLGERQQPSIWSGDAEIVEAFYDFSAKVRQIEKVIDSRNLDRTLRNRCGAGVLPYELLAPSSEPGVTCRGVPNSVST* 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0351 927 Gene3D - 234 336 - -
Gso7g0351 927 PANTHER LIPOXYGENASE 26 926 IPR000907 GO:0016702|GO:0046872
Gso7g0351 927 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 232 927 IPR013819 GO:0016702|GO:0046872
Gso7g0351 927 Pfam Lipoxygenase 242 910 IPR013819 GO:0016702|GO:0046872
Gso7g0351 927 SMART LH2_4 91 230 IPR001024 GO:0005515
Gso7g0351 927 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 91 233 IPR036392 GO:0005515
Gso7g0351 927 SUPERFAMILY Lipoxigenase 235 926 IPR036226 -
Gso7g0351 927 ProSiteProfiles PLAT domain profile. 107 229 IPR001024 GO:0005515
Gso7g0351 927 MobiDBLite consensus disorder prediction 61 83 - -
Gso7g0351 927 Pfam PLAT/LH2 domain 142 228 IPR001024 GO:0005515
Gso7g0351 927 Gene3D - 337 424 IPR027433 -
Gso7g0351 927 PANTHER LIPOXYGENASE 3, CHLOROPLASTIC 26 926 - -
Gso7g0351 927 PRINTS Plant lipoxygenase signature 199 217 IPR001246 GO:0016491
Gso7g0351 927 PRINTS Plant lipoxygenase signature 225 246 IPR001246 GO:0016491
Gso7g0351 927 PRINTS Plant lipoxygenase signature 264 280 IPR001246 GO:0016491
Gso7g0351 927 PRINTS Plant lipoxygenase signature 297 316 IPR001246 GO:0016491
Gso7g0351 927 PRINTS Plant lipoxygenase signature 365 386 IPR001246 GO:0016491
Gso7g0351 927 PRINTS Plant lipoxygenase signature 412 428 IPR001246 GO:0016491
Gso7g0351 927 PRINTS Plant lipoxygenase signature 451 470 IPR001246 GO:0016491
Gso7g0351 927 PRINTS Plant lipoxygenase signature 518 542 IPR001246 GO:0016491
Gso7g0351 927 PRINTS Plant lipoxygenase signature 839 853 IPR001246 GO:0016491
Gso7g0351 927 Gene3D - 560 926 - -
Gso7g0351 927 PRINTS Lipoxygenase signature 563 580 IPR013819 GO:0016702|GO:0046872
Gso7g0351 927 PRINTS Lipoxygenase signature 581 598 IPR013819 GO:0016702|GO:0046872
Gso7g0351 927 PRINTS Lipoxygenase signature 601 621 IPR013819 GO:0016702|GO:0046872
Gso7g0351 927 CDD PLAT_LH2 91 230 IPR042057 -
Gso7g0351 927 Gene3D PLAT/LH2 domain 78 233 - -
Gso7g0351 927 ProSitePatterns Lipoxygenases iron-binding region signature 2. 608 618 IPR020834 GO:0016702|GO:0046872
Gso7g0351 927 Gene3D - 425 558 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0351 Gso-Chr7 3304618 3311096 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0351 1 926 Acyl Lipid Metabolism Gene Families AT1G17420 71.781 0.0 1385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0351 K00454 - gmx:100793614 1819.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0351 7 3304618 3311096 Gso7g0351 7 3304618 3311096 ECH
Gso7g0351 7 3304618 3311096 Gso16g0065 16 748243 755172 GST