Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0344 ATGAAGATGATTCACTTTCTTTTCCTCTTTGCTCTTGTCTCGTTCACTTCCCATGCTTCTGTCAATGATTTCTGTGTAGCAGACCTAAAAGGTCCAGATAGCCCTTCAGGCTATCAGTGCAAGCCACCTAACACAGTCACAGTGGATGACTTTGTGTTCTCTGGCTTTGTAGCTGGAAACACCACAAACACTTTCAATGCTGCATTAACCTCCGCATTTGTTACTGATTTTCCAGGTGTGAATGGTCTTGGTGTATCTGCGGCACGGTTAGACATAGCCAAAGGTGGATCAATCCCAATGCACACACACCCTGCTGCCACTGAACTTCTAATAATGGTGGAAGGTCAAATCACTGCTGGTTTTATGACCCCAACTGCACTTTATACCAAGACACTGAAACCTGGAGATATTATGGTTTTTCCACAAGGACAGTTGCATTTTCAGGTTAATTCTGGAAACGGAAAAGCCACTGCTTTTCTGGCATTCAGTAGTGCAAACCCTGGAGCACAACTACTTGACCTTCTGTTATTTGGCAACACCTTGCCTTCTGACTTGGTTGCACAAACTACCTTCCTTGATGTTGCACAAGTCAAGAAACTTAAGGCTCGTTTCGGTGGCAGAGGCTAG 627 0.4466 MKMIHFLFLFALVSFTSHASVNDFCVADLKGPDSPSGYQCKPPNTVTVDDFVFSGFVAGNTTNTFNAALTSAFVTDFPGVNGLGVSAARLDIAKGGSIPMHTHPAATELLIMVEGQITAGFMTPTALYTKTLKPGDIMVFPQGQLHFQVNSGNGKATAFLAFSSANPGAQLLDLLLFGNTLPSDLVAQTTFLDVAQVKKLKARFGGRG* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0344 208 CDD cupin_OxOx 17 204 - -
Gso7g0344 208 SMART Cupin_1_3 54 198 IPR006045 -
Gso7g0344 208 Gene3D Jelly Rolls 18 207 IPR014710 -
Gso7g0344 208 PANTHER GERMIN-LIKE PROTEIN 5 204 - -
Gso7g0344 208 Pfam Cupin 57 198 IPR006045 -
Gso7g0344 208 SUPERFAMILY RmlC-like cupins 23 205 IPR011051 -
Gso7g0344 208 PRINTS Germin signature 101 121 IPR001929 GO:0030145
Gso7g0344 208 PRINTS Germin signature 130 150 IPR001929 GO:0030145
Gso7g0344 208 PRINTS Germin signature 163 178 IPR001929 GO:0030145
Gso7g0344 208 ProSitePatterns Germin family signature. 96 109 IPR019780 GO:0030145
Gso7g0344 208 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 5 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0344 Gso-Chr7 3238693 3239646 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0344 1 206 Miscellaneous Gene Families AT5G20630 58.373 5.74e-80 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0344 - - gmx:100527498 417.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0344 7 3238693 3239646 Gso16g0058 16 671743 672885 GST