Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0058 ATGGTAAACCTTTTTGGTGGAAAAAAGTCAACCTTCTTGGTTATGACGAAGACTATGGTTCTCATTCTTTTCTTTCTCGCTCTTATTTCATCCACATCTCATGCTTCTAATTTTAATGATTTCTGCGTAGCAGACCTCAAGGCTCCAGAGAGCCCTTCTGGCTATCCTTGTTTACCACCTAATACTTTGACGGCAGATAACTTTGTGTTCACTCTTCAACTTCCAAACACCACAAACCCTTTACTCAAAGCAGGAATTAACACTGCATTTGTCAATGACTTTCCTGCTCTCAATGGCCTTGGCGTCTCTGCAGCACGTGTAGTTATTGAAAAAGATGGATTTTTTCCACTGCACACACATTCAGATGCCACTGAACTAATAATCACAGTAGAAGGTGAAATCACTGCTGGATTCGTGACACCTACGAAAGCTTATGTGAAGACGCTGAAATCCGGAGATCTTATGGTTATCCCAAAGGGACTATTGCATTTTGTTGTGAATTCTTGTAAGGGGAAATCTACTGGTTTTGCAGTTTTTAGTAGCTCAAACCCTGATGTCCAATTATTTAATGATATATTTGCCAACAATGTACCTTCTCACATACTTGCACAAACTACCTTCCTTGATGTTGCCCAAGTCAAGAAGCTTAAGGCTCGTTTCGGTGGCAGCGGCTAG 675 0.4104 MVNLFGGKKSTFLVMTKTMVLILFFLALISSTSHASNFNDFCVADLKAPESPSGYPCLPPNTLTADNFVFTLQLPNTTNPLLKAGINTAFVNDFPALNGLGVSAARVVIEKDGFFPLHTHSDATELIITVEGEITAGFVTPTKAYVKTLKSGDLMVIPKGLLHFVVNSCKGKSTGFAVFSSSNPDVQLFNDIFANNVPSHILAQTTFLDVAQVKKLKARFGGSG* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0058 224 SUPERFAMILY RmlC-like cupins 37 221 IPR011051 -
Gso16g0058 224 SMART Cupin_1_3 70 214 IPR006045 -
Gso16g0058 224 CDD cupin_OxOx 34 220 - -
Gso16g0058 224 Gene3D Jelly Rolls 33 224 IPR014710 -
Gso16g0058 224 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 22 220 - -
Gso16g0058 224 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 1 22 220 - -
Gso16g0058 224 Pfam Cupin 86 214 IPR006045 -
Gso16g0058 224 PRINTS Germin signature 118 138 IPR001929 GO:0030145
Gso16g0058 224 PRINTS Germin signature 147 167 IPR001929 GO:0030145
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0058 Gso-Chr16 671743 672885 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0058 17 223 Miscellaneous Gene Families AT5G20630 46.190 1.28e-58 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0058 - - gsj:114391045 440.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0344 7 3238693 3239646 Gso16g0058 16 671743 672885 GST