Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0317 ATGAATTTGCAACAAGTTGGACAGCCTAAATCATCTAATGGATATGGTTGTTGGAAATCTGAAAAAGAAGGGGCAACTAAGTCTGATAATAAGATCCCGTCTGGAAAGTCAAATGCCAGCAGCAGATTAGCAAGTGTAGTGACTGGCAATAAAGGTGGTAGTTATGGGAGTCCTTCACATGATCGATTAGTATATTTAAAAACATGCCTTATTGGGCAGCATGTGGAAGTCCAGGTGAAAAATGGATCTATATACTCTGGAATATTTCATGCAACAAATTCTGGCAAAGATTTTGGAATCATTTTGAAAATGGCTCACTTAACAAAGGATGCTGCTTTGCAAGGAAAAGAATCTGGTGTAGAATTTGTCAGTAAAGCTCCTTTTAAGACTTTAATTATACCTGCCAACGACCTTGTACAAGTTATTGCAAAGGATGTTGCTGTTTCTAGAGATGGCCTACCTAGTGAATCTCACTATGATATGCATCAGGAGATCATGGTTGATTCAGTAATATCTCAATCCTGTCATGTCGAGACAGGGAGAGAATTACAGCGATGGGTACCTGATGAAGATGATCCACAATGCCCTGAACTGGAAAATATCTTTGATGGCCCTTGGAATAGGGGATGGGATCAGTTTGAAACAAATGAAATGTTGTTCGGTGTAAAAAGCACATTCAATGAGGATTTCTATACAACAAAGCTCGAAAAAGGGCCCAAGACAAGAGAGTTGGAAAAGCAAGCTTTAAGAATAGCAAGAGAAATTGAGGGTGAGGAAACACAAGATCTTCATCTAGCAGAGGAAAGAGGCCTTTACCATAACTTTGATATTGATGAAGAAACCAGATTCTCTTCAGTCTATAGGGGTAAAGGTGTTGATGATAGTGAATATGATGAAAATGAGGACAAGCTCTTGGATTCACACAATTCTGAAACATTTGATAATATTTATGATTTAGTCAATAAGAGACCAGTTGAAGCAAGAGGTCAGAAAGGCAGTAATGGAGCTCAAACATGGTCAAATTTCTCCTCTGTGGATCACTCAAAGTTATCTCAGTCAAGTACTGGTGTGGATTTATGTCGCTCTGGTTCTAATTATCATGCTAAGCAGTTAGCATCTGAACTCCCTGCCCAGAGTTGCTCATTTTCAGATGGAAAAAGCAGGATTCAGCAGAACTCAGTTAATAACCTACATGGAGTCAATGATAATACTGTTGAAGAAAATTGGATACAAACCGAGGATGTCCAACTGTCAAAATCTGAGGATTTACAGTCATCACTTAAGTTGAAGAAAGATGGCTCCGATGAAGGGGGGTTATCTACTAATGTGGCCTCCTGTGCCCCTTCTACTCATATTTTATCAACGACTCCTGAAGAAACTGGGTCAGTTGGGGAAACAAGGTCTGTAATTTCACATGGAAGACTAGGTAGTTTTACATCAATGGGTTCAGATTATGTGGCAGCAACCTCTGGTCCTGGTCTATCACCAAGTTCTTCAGTTGGTTCAATGTCTTCGGAAAAATCAACTCTGAATCCCAATGCCAAGGAGTTCAGGCTCAACCCTAATGCAAAGAGTTTTGTTCCATCTCAATCACATGCTAGGCCCCGCTCCCCAGTGTCTGATGGTTCTTTCTATTTCCCGACTACCGTACCCACCGTACCAAATATGCCAGCCATGCCCATGGGTATTGGAGTTGGAACTACTTTTGTGGGGCCACAACCTGTCATATATAATCCACAAGCGGCACAAATGCCATCCCAACCATATTTTCATCCAAATGGACCACAGTATGGACAACTTGGTCATCCTAGGCAAGTTTTATACGTGCCAAGTTACCTCCCTGAGATGCCATATAAGGGACGGGATTATTGA 1872 0.4092 MNLQQVGQPKSSNGYGCWKSEKEGATKSDNKIPSGKSNASSRLASVVTGNKGGSYGSPSHDRLVYLKTCLIGQHVEVQVKNGSIYSGIFHATNSGKDFGIILKMAHLTKDAALQGKESGVEFVSKAPFKTLIIPANDLVQVIAKDVAVSRDGLPSESHYDMHQEIMVDSVISQSCHVETGRELQRWVPDEDDPQCPELENIFDGPWNRGWDQFETNEMLFGVKSTFNEDFYTTKLEKGPKTRELEKQALRIAREIEGEETQDLHLAEERGLYHNFDIDEETRFSSVYRGKGVDDSEYDENEDKLLDSHNSETFDNIYDLVNKRPVEARGQKGSNGAQTWSNFSSVDHSKLSQSSTGVDLCRSGSNYHAKQLASELPAQSCSFSDGKSRIQQNSVNNLHGVNDNTVEENWIQTEDVQLSKSEDLQSSLKLKKDGSDEGGLSTNVASCAPSTHILSTTPEETGSVGETRSVISHGRLGSFTSMGSDYVAATSGPGLSPSSSVGSMSSEKSTLNPNAKEFRLNPNAKSFVPSQSHARPRSPVSDGSFYFPTTVPTVPNMPAMPMGIGVGTTFVGPQPVIYNPQAAQMPSQPYFHPNGPQYGQLGHPRQVLYVPSYLPEMPYKGRDY* 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0317 623 PANTHER ATAXIN-2 HOMOLOG 4 616 - -
Gso7g0317 623 PANTHER ATAXIN 2-RELATED 4 616 IPR045117 GO:0003723
Gso7g0317 623 MobiDBLite consensus disorder prediction 1 15 - -
Gso7g0317 623 MobiDBLite consensus disorder prediction 489 518 - -
Gso7g0317 623 Coils Coil 241 261 - -
Gso7g0317 623 MobiDBLite consensus disorder prediction 331 356 - -
Gso7g0317 623 MobiDBLite consensus disorder prediction 1 43 - -
Gso7g0317 623 SMART LsmAD_2 220 289 IPR009604 -
Gso7g0317 623 Pfam LsmAD domain 220 288 IPR009604 -
Gso7g0317 623 MobiDBLite consensus disorder prediction 327 356 - -
Gso7g0317 623 MobiDBLite consensus disorder prediction 426 445 - -
Gso7g0317 623 Pfam Ataxin 2 SM domain 60 144 IPR025852 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0317 Gso-Chr7 2954095 2964298 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0317 - - gmx:100796073 1248.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0317 7 2954095 2964298 Gso16g0039 16 431160 441368 GST