Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0039 ATGAATTTGCAACAAATTGGGCAGCCTAAATCATCTAATGGATATGGTCATCAGAAATCTGAAAAAGAAGGGGCAACTAAGTCTGATAATAAGCTCCCATCTGTAAAGTCAAATTCTAGCAGCAGATTAGCAGGAGTAGTGACTGGCAATAAAGGTGGTGGTTATGGGAGTCCTTCACATGATCGATTAGTATATTTAACAACATGCCTTATTGGGCAGCATGTGGAAGTCCAGGTGAAAAATGGATCTATATACTCTGGAATATTTCATGCAACAAATTCTGACAAAGATTTTGGAATCATTTTGAAAATGGCTCGCTTGACAAAGGCTGCCTCTTTGCAAGGACAGGGATCTGGTGTAGAATTTGTCAGCGAAGCTCCTTCTAAGACTTTAATTATACCTGCCAACGACCTTGCACAAGTTATAGCAAAGGATGTTGCTGTTTCCAGAGATGGCCTACCTAGTGAATCTCACTATGATATGCATCACGAAATCATGGTTGATTCAGTAATATCTCAATCCTGTCATGTTGAGACAGGGAGAGAATTACAGCGATGGGTACCTGATGAAGATGATCAACAATGCCCTGAACTGGAAAATATCTTTGATGGCCCTTGGAATAGGGGATGGGATCAGTTTGAAACAAATGAAATGTTGTTCGGTGTAAAAAGCACATTCAACGAGGATTTCTATACAACAAAGCTTGAAATAGGGCCCCAGACTAGAGAGTTGGAAAAGCAAGCTTTAAGAATAGCAAGAGAAATTGAGGGTGAGGAAACACAAGATCTTCATCTAGCAGAGGAAAGAGGCCTTTACCATAACTTTGATATTGATGAAGAAACCAGATTCTCTTCAGTCTATAGGGGTAAAGGTGTTGATGATAGTGGATATGATGAAAATGAGGACAGGCTCTTGGATTCACATAATTCTGAAACTTTTGATAATATTTATGGTTTAGTCAATAAGAGCCCAGGTGAAGCAAGTGGTCGGAAAGGCAGTAATGGAGCTCAAACGTGGTCAAATTTCTCCTCTGTGTTTCATGCACAGAATCACTCAGAGTTATCTCAGTCAAGTTCTGGTGTGGATTTATGTCGCTCTGGTTCTAAAGATCATGCTAAGCAGTTATCATCTGAACTCCCTGCCCTGAGTTGCTCATTTTCAGATGGAGAAAGCAGGATTCAGCTGAACTCAGTTAATAACCTACATGGAGTCAATGATAATACTGTGGAAGAAAATTGGATACAAGCTGAGGATGTTCAACTTTTAAAATCTGAGGATTTACAGTCATCACTTAAGTTGAAGAAAGATGGCTCTGATGAAGGGGGTTTATCTACTAATGTGGCCTTGTGTGCCCCTTCTACTCGTATTTTATCAAAGACTCCTAAAGAAACTGGGTCAGTTGGGGAATCAAAGTCTGTAATTTCACGTGGAAGACTAGGTAGATCATTGGGTTCTGATTATGTGGCAGCAACCTCTGGTCCTGGTCTATCACCAAGTTCTTCAGTTGGTTCACTGTCTTCGGAAAAATCAACTCTGAATCCCAATGCCAAGGAGTTCAGGCTCAACCCTAATGCAAAGAGTTTTATTCCGTCTCAATCACATGCTAGGCCCCGCTCCCCCATGTCTGATGGTTCCTTCTATTTCCCAGCTACTGTATCCACCATACCAAATATGCCAGCCATGTCCATGGGTATTGGAGTTGGGACTACTTTTGCAGGGCCACAACCAGTCGTATATAATCCACAAGCGGCACAAATGCCATCCCAACCATATTTTCATCCAAATGGACCACAGTATGGACAACTTCTTGGTCATCCTAGGCAAGTTTTATACATGCCAAGTTACCTCCCTGAGATGCCATATAAGGGACGGGATCATTGA 1881 0.4147 MNLQQIGQPKSSNGYGHQKSEKEGATKSDNKLPSVKSNSSSRLAGVVTGNKGGGYGSPSHDRLVYLTTCLIGQHVEVQVKNGSIYSGIFHATNSDKDFGIILKMARLTKAASLQGQGSGVEFVSEAPSKTLIIPANDLAQVIAKDVAVSRDGLPSESHYDMHHEIMVDSVISQSCHVETGRELQRWVPDEDDQQCPELENIFDGPWNRGWDQFETNEMLFGVKSTFNEDFYTTKLEIGPQTRELEKQALRIAREIEGEETQDLHLAEERGLYHNFDIDEETRFSSVYRGKGVDDSGYDENEDRLLDSHNSETFDNIYGLVNKSPGEASGRKGSNGAQTWSNFSSVFHAQNHSELSQSSSGVDLCRSGSKDHAKQLSSELPALSCSFSDGESRIQLNSVNNLHGVNDNTVEENWIQAEDVQLLKSEDLQSSLKLKKDGSDEGGLSTNVALCAPSTRILSKTPKETGSVGESKSVISRGRLGRSLGSDYVAATSGPGLSPSSSVGSLSSEKSTLNPNAKEFRLNPNAKSFIPSQSHARPRSPMSDGSFYFPATVSTIPNMPAMSMGIGVGTTFAGPQPVVYNPQAAQMPSQPYFHPNGPQYGQLLGHPRQVLYMPSYLPEMPYKGRDH* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0039 626 PANTHER ATAXIN 2-RELATED 4 619 IPR045117 GO:0003723
Gso16g0039 626 MobiDBLite consensus disorder prediction 30 46 - -
Gso16g0039 626 MobiDBLite consensus disorder prediction 490 518 - -
Gso16g0039 626 Pfam LsmAD domain 220 288 IPR009604 -
Gso16g0039 626 PANTHER ATAXIN-2 HOMOLOG 4 619 - -
Gso16g0039 626 MobiDBLite consensus disorder prediction 492 518 - -
Gso16g0039 626 MobiDBLite consensus disorder prediction 1 15 - -
Gso16g0039 626 Pfam Ataxin 2 SM domain 60 144 IPR025852 -
Gso16g0039 626 Coils Coil 241 261 - -
Gso16g0039 626 MobiDBLite consensus disorder prediction 1 54 - -
Gso16g0039 626 SMART LsmAD_2 220 289 IPR009604 -
Gso16g0039 626 Gene3D - 67 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0039 Gso-Chr16 431160 441368 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0039 - - gmx:100778053 1214.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0317 7 2954095 2964298 Gso16g0039 16 431160 441368 GST