Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gso7g0133 | ATGGACAGAAACCAATCCCGCAGGCAGGTTGCCGCAATGAAACAGTCCCTCTTTGATCAGGGGTTCCTGGACGAACAGTTTATCCAACTGGAAGAATTGCAGGATGATGCAAATCCTAACTTTGTTGAGGAAATCGTGACTCTTCACTACCGTGATTCGTCACGGCTTATCTCAAGCATAGAGCAGGCTCTCAAAGAGAGGAACCCTCTGGATTTCAACAAGCTGGACACACTTATGCATCAGTTCAAAGGAAGCAGTTCAAGCATAGGAGCCAAAAAGGTGAAAGCAGAGTGCAATCTGTTCAGGGAATATTGCAGGACAGGAAATGCAGAAGGATGCATGAGGAGCTTCCAACAACTGAAGAGAGAATATGCTGCACTGAGAAAGAAACTTGAAGCTTATTTTCAGTTGGCTAGGCAAGCTGGACCCCAGGAAACAGCATGTCGCTCCAAATGA | 456 | 0.4627 | MDRNQSRRQVAAMKQSLFDQGFLDEQFIQLEELQDDANPNFVEEIVTLHYRDSSRLISSIEQALKERNPLDFNKLDTLMHQFKGSSSSIGAKKVKAECNLFREYCRTGNAEGCMRSFQQLKREYAALRKKLEAYFQLARQAGPQETACRSK* | 152 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gso7g0133 | 151 | PANTHER | - | 3 | 147 | IPR045871 | GO:0000160|GO:0009927|GO:0043424 | |
| Gso7g0133 | 151 | SUPERFAMILY | Histidine-containing phosphotransfer domain, HPT domain | 6 | 140 | IPR036641 | GO:0000160 | |
| Gso7g0133 | 151 | PANTHER | HISTIDINE-CONTAINING PHOSPHOTRANSFER PROTEIN 4 | 3 | 147 | - | - | |
| Gso7g0133 | 151 | Gene3D | HPT domain | 1 | 147 | IPR036641 | GO:0000160 | |
| Gso7g0133 | 151 | ProSiteProfiles | Histidine-containing phosphotransfer (HPt) domain profile. | 38 | 134 | IPR008207 | GO:0000160 | |
| Gso7g0133 | 151 | Coils | Coil | 110 | 137 | - | - | |
| Gso7g0133 | 151 | Pfam | Hpt domain | 50 | 128 | IPR008207 | GO:0000160 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Gso7g0133 | Gso-Chr7 | 1238014 | 1240090 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Gso7g0133 | K14490 | - | gmx:100526849 | 301.982 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Gso7g0133 | 7 | 1238014 | 1240090 | Gso7g0133 | 7 | 1238014 | 1240090 | ECH | |
| Gso7g0133 | 7 | 1238014 | 1240090 | Gso8g1670 | 8 | 16342347 | 16344506 | GST | |
| Gso15g0179 | 15 | 1536436 | 1537861 | Gso7g0133 | 7 | 1238014 | 1240090 | PCT | |
| Gso11g3632 | 11 | 52004970 | 52006327 | Gso7g0133 | 7 | 1238014 | 1240090 | PCT | |
| Gso7g0133 | 7 | 1238014 | 1240090 | Gso15g0179 | 15 | 1536436 | 1537861 | PCT | |
| Gso7g0133 | 7 | 1238014 | 1240090 | Gso11g3632 | 11 | 52004970 | 52006327 | PCT |