Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0179 ATGGACAAAATCCCTTCCCGCAGGCAGGTTGCTGCCATGAAACAGTCCCTCTTTGATCAGGGATATCTGGATGAGCAGTTTATCCAACTGGAAGAATTGCAGGATGATGCTAATCCTAACTTCGTTGAAGAAATTGTCACTCTTTACTACCGTGATTCCTCCAGGCTTATCTCTAGCTTGGACCACACTCTGGAAAGTAACCCACTGGATTTCAACAAGCTGGACACAATTATGCATCAGTTTAAAGGAAGCAGCTCAAGCATCGGAGCCAAAAAGGTGAAAGCAGAGTGCACTCTGTTCAGGGAATATTGCAGGGCAAGAAATGGAGAAGGATGCAGGAGGAGCTTCCAACAAATGAAGAGAGAATATGCAACACTGAGAAAGAAACTTGAAACATATTTTCAGCTGGCTAGGCAAGTTGGGCCCGTGGAGACAGCATTTAGGCCCAAGTAA 453 0.4525 MDKIPSRRQVAAMKQSLFDQGYLDEQFIQLEELQDDANPNFVEEIVTLYYRDSSRLISSLDHTLESNPLDFNKLDTIMHQFKGSSSSIGAKKVKAECTLFREYCRARNGEGCRRSFQQMKREYATLRKKLETYFQLARQVGPVETAFRPK* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0179 150 PANTHER HISTIDINE-CONTAINING PHOSPHOTRANSFER PROTEIN 4 6 146 - -
Gso15g0179 150 ProSiteProfiles Histidine-containing phosphotransfer (HPt) domain profile. 38 133 IPR008207 GO:0000160
Gso15g0179 150 Gene3D HPT domain 6 146 IPR036641 GO:0000160
Gso15g0179 150 Pfam Hpt domain 44 127 IPR008207 GO:0000160
Gso15g0179 150 PANTHER - 6 146 IPR045871 GO:0000160|GO:0009927|GO:0043424
Gso15g0179 150 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 7 140 IPR036641 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0179 Gso-Chr15 1536436 1537861 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0179 K14490 - gmx:100794149 301.982
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0179 15 1536436 1537861 Gso11g3632 11 52004970 52006327 GST
Gso15g0179 15 1536436 1537861 Gso7g0133 7 1238014 1240090 PCT
Gso15g0179 15 1536436 1537861 Gso8g1670 8 16342347 16344506 PCT
Gso7g0133 7 1238014 1240090 Gso15g0179 15 1536436 1537861 PCT
Gso8g1670 8 16342347 16344506 Gso15g0179 15 1536436 1537861 PCT