Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0086 ATGGCAAATAGTGAGACTTGTTGTTCAACTCAGCTTATTGATGGAGATGGTACATTCAATGTTTCTGGGGTTGAAAATTTCATGAAGGAGGTGAAGTTGGCTGAATGTGGGCTTTCATATGCCGTAGTTTCTATAATGGGTCCTCAAAGTAGTGGCAAGAGCACACTGTTAAATCATTTGTTTGGTACCAACTTCAGAGAGATGGATGCTTTTAAGGGAAGGTCTCAAACAACCAAAGGAATCTGGATGGCTAGATGTGCTGGCATAGAGCCTTGTACACTTGTGATGGATTTGGAGGGTACAGATGGAAGAGAACGCGGAGAGGATGACACTGCTTTTGAAAAGCAGAGTGCTCTATTTGCTCTTGCTGTCTCAGATATAGTGCTAATAAACATGTGGTGCCATGACATTGGCCGTGAGCAAGCTGCAAATAAGCCACTTTTGAAAACTGTCTTTCAGGTCATGATGAGATTGTTTAGTCCACGAAAAACAACATTGTTGTTTGTCATACGCGATAAAACAAGGACACCACTTGAAAATTTAGAACCTGTTTTGCGAGAAGATATTCAGAAGATATGGGACTCTGTTCCTAAACCACAGGCCCACAAGGAAACCCCATTAAGTGAATTTTTCAATGTTGAAGTTGTTGCTCTTTCTAGTTATGAAGAAAAGGAAGAGCAATTTAAAGATCAGGTTGCTAGCTTGCGGCAACGGTTCCATCATTCTATCGCTCCTGGTGGGCTTGCAGGGGATCGGCGTGGAGTAGTTCCTGCTTCTGGCTTTTCTTTTAGTTCTGAGCATATATGGAAAGTCATTAAGGAGAACAAAGATCTCGATCTTCCTGCACATAAGGTTATGGTTGCTACTGTACGATGTGAAGAAATAGCCAACGAGAAATATGTTTCTTTTGTTGCAAATGAGGATTGGTGTCAATTGGAAGAGGCTGTGCAATCTGGCCCTATTCCTGGATTTGGGAAAAAGCTCAGTTCACTTCTTGATATTTGTTTTTCAGAGTATGATGCTGAAGCCACCTATTTTGACGAAGGTGTGAGATCTTCCAAACAAAAGCAACTACAAGAAAAATTGTTCCAACTTGTCCAACCAGCATTCCAATCTGCGCTGGGACATATAAGATCTGGAACTTTGGATAAATTCAAGGAGGCATTTGACAAGACTTTGAAAGGAGGGGAAGGATTTTCTGTGGCTGCTAATAATTGCATTGGGTCTTGTATGGTTCAATTTGATGAAGCATGCACAGATGTTGTTATTGAACAAACAAACTGGGATACATCTAAAGTACGAGAGAAACTGCTGCGTGATATTGATGCACATGTTGCAACTGTACGTGCAACCAAGATTTCTGAACTTACTTCATCATATGAGGAAAAACTTAAACAAGCTTTGTCTGGACCTGTTGAAGCTCTTTTGGACGGAGCTAATAGTGATACTTGGCCATCAATAAGGAATCTTTTTAGGCGTGAGACTGAATCAGCTGTTTCAGGGTTCTCTGCTGCACTTACTGGGTTTGATATGGATGAAGAAACAAGGCAGAAAATAATTTTGAGTTTAGAGGATTATGCAAGGGGTCTGGTAGAAGGAAAGGCTCGGGAAGAAGCTGGAAGAGTTCTAATCCGCATGAAAGACAGGTTTACGATGTTGTTTAGCCATGATTCTGATTCAATGCCTCGTGTTTGGACGGGTAAAGAAGATATACGAGCCATCACCAAGACTGCTCGCTCTTCTTCTTTGAAGTTGCTATCTGTTATGGCTGCAATTCGTTTGGATGATGATGACACTGACAATATTGAGAAGGTGTTAGCAGTTGCATTGGTGGATTCATCACCAAATAGTAATGCTACAAGGAGCATGACAATGGTTGATCCACTAGCTTCTAGCAGCTGGGAACAGGTTTCATCCTCTAAAACATTGATTACACCTGTCCAGTGCAAGTCTTTGTGGAGGCAATTCAAGACAGAGACAGAGTACAGTGTCTCTCAGGCCATTTCTGCACAGGAGGCCAACAAGCGCAACAACAACTGGTTACCTCCCCCATGGGCAATAGTTGCTTTGGTTATCCTGGGATTTAATGAATTTATGACACTTCTAAGAAATCCCTTGTATTTGGGTGTCATCTTTGTTGGTTTTCTTCTCATTAAAGCCCTATGGGTGCAGCTTGATGTTTCGGGTGAATTTCGCAATGGAGCTCTTCCAGGAATCATATCCTTGTCTAGCAAGTTTATTCCAACTATCATGAACCTTATGAAAAAACTAGCAGAGGAGGGACAGAACCCTGCAGCTAACAATCCTCAGAGAACCCCATCAAAAAGCAGTTACAATGAGGGTCATGCCGTGTCATCTAGCGCCTCATCTAACTTGACTAGATTGGACAACGGAACCGAGTATGCGAGTCCATTAAAAGATGAGTAG 2427 0.4194 MANSETCCSTQLIDGDGTFNVSGVENFMKEVKLAECGLSYAVVSIMGPQSSGKSTLLNHLFGTNFREMDAFKGRSQTTKGIWMARCAGIEPCTLVMDLEGTDGRERGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLLFVIRDKTRTPLENLEPVLREDIQKIWDSVPKPQAHKETPLSEFFNVEVVALSSYEEKEEQFKDQVASLRQRFHHSIAPGGLAGDRRGVVPASGFSFSSEHIWKVIKENKDLDLPAHKVMVATVRCEEIANEKYVSFVANEDWCQLEEAVQSGPIPGFGKKLSSLLDICFSEYDAEATYFDEGVRSSKQKQLQEKLFQLVQPAFQSALGHIRSGTLDKFKEAFDKTLKGGEGFSVAANNCIGSCMVQFDEACTDVVIEQTNWDTSKVREKLLRDIDAHVATVRATKISELTSSYEEKLKQALSGPVEALLDGANSDTWPSIRNLFRRETESAVSGFSAALTGFDMDEETRQKIILSLEDYARGLVEGKAREEAGRVLIRMKDRFTMLFSHDSDSMPRVWTGKEDIRAITKTARSSSLKLLSVMAAIRLDDDDTDNIEKVLAVALVDSSPNSNATRSMTMVDPLASSSWEQVSSSKTLITPVQCKSLWRQFKTETEYSVSQAISAQEANKRNNNWLPPPWAIVALVILGFNEFMTLLRNPLYLGVIFVGFLLIKALWVQLDVSGEFRNGALPGIISLSSKFIPTIMNLMKKLAEEGQNPAANNPQRTPSKSSYNEGHAVSSSASSNLTRLDNGTEYASPLKDE* 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0086 808 Hamap Protein SEY1 [SEY1]. 9 765 IPR008803 -
Gso7g0086 808 Pfam Root hair defective 3 GTP-binding protein (RHD3) GTPase domain 46 281 - -
Gso7g0086 808 CDD GBP 36 239 - -
Gso7g0086 808 Coils Coil 218 238 - -
Gso7g0086 808 Pfam Sey1 three-helix bundle domain 323 760 IPR046758 -
Gso7g0086 808 ProSiteProfiles GB1/RHD3-type guanine nucleotide-binding (G) domain profile. 37 252 IPR030386 GO:0005525
Gso7g0086 808 MobiDBLite consensus disorder prediction 763 798 - -
Gso7g0086 808 PANTHER PROTEIN SEY1 3 801 IPR008803 -
Gso7g0086 808 MobiDBLite consensus disorder prediction 761 808 - -
Gso7g0086 808 Gene3D - 15 245 IPR027417 -
Gso7g0086 808 PANTHER PROTEIN ROOT HAIR DEFECTIVE 3 HOMOLOG 3 801 - -
Gso7g0086 808 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 249 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0086 Gso-Chr7 749294 759460 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0086 K22698 - gmx:100777656 1585.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0086 7 749294 759460 Gso8g1599 8 15637681 15646516 GST
Gso15g0214 15 1927860 1936460 Gso7g0086 7 749294 759460 PCT
Gso11g3598 11 51669752 51678354 Gso7g0086 7 749294 759460 PCT
Gso7g0086 7 749294 759460 Gso15g0214 15 1927860 1936460 PCT
Gso7g0086 7 749294 759460 Gso11g3598 11 51669752 51678354 PCT