Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0083 ATGACTGATAGGGTTCACCCTTCGGCCAAAACCACCGCCAACGCCGGCCCCAAGCCGACATTCCCCGCTACGAAATCCCAGCTTTCCGGCGCCAACCGCCCCACCTACCGCCCCCAACCGCAGCACCACCGCCGCCGCCGTAGTCGCGGATGTGCCTCCACCCTCTGCTGCTGGCTCCTCCTGATCCTCCTCTTCCTCCTCCTCCTCGTCGGTGCCGCCGGCACCGTCCTCTACTTTCTCTACCGTCCCCAACGACCCACATTCTCCGTCACCTCCCTAAAACTCTCTTCCTTCAACCTCACCACTCCCTCCACCATCAGCGCCAAGTTTGACCTCACTCTCTCAACAACTAACCCTAACGACAAAATCATCTTCTCCTACGACCCTACCTCCGTATCCCTTCTCTACGGCGACACCGCCGTCGCCAGCACCACCATCCCCTCCTTCCTCCACCGCCAAAGGAACACCACCGTGCTCCAGGCTTATGTTACTAGCACTGAGGAAGTGGTGGATAGTGACGCCGCGATGGAGCTGAAGAGGAGCATGAAGAGGAAGAGTCAGCTGGTGGCGCTGAAGGTGGAGCTGGAGACCAAGGTGGAGGCCCAGATGGGCGTGTTCCAGACGCCTCGAGTCGGGATCAAGGTTCTGTGCGACGGCGTCGCCGTATCTCTCCCCGACGATGAGAAACCGGCGACGGCGTCGGCTGAGAATACGGCGTGCCAGGTGGATGTGAGGTTTAAGGTCTGGAAATGGACCGTTGGATGA 765 0.6026 MTDRVHPSAKTTANAGPKPTFPATKSQLSGANRPTYRPQPQHHRRRRSRGCASTLCCWLLLILLFLLLLVGAAGTVLYFLYRPQRPTFSVTSLKLSSFNLTTPSTISAKFDLTLSTTNPNDKIIFSYDPTSVSLLYGDTAVASTTIPSFLHRQRNTTVLQAYVTSTEEVVDSDAAMELKRSMKRKSQLVALKVELETKVEAQMGVFQTPRVGIKVLCDGVAVSLPDDEKPATASAENTACQVDVRFKVWKWTVG* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0083 254 MobiDBLite consensus disorder prediction 1 36 - -
Gso7g0083 254 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 1 252 - -
Gso7g0083 254 Gene3D - 75 215 - -
Gso7g0083 254 SUPERFAMILY LEA14-like 65 160 - -
Gso7g0083 254 PANTHER CHAPERONIN CPN60-LIKE PROTEIN 1 252 - -
Gso7g0083 254 Pfam Late embryogenesis abundant protein 113 215 IPR004864 -
Gso7g0083 254 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0083 Gso-Chr7 723706 725014 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0083 44 241 EF-hand Containing Proteins AT5G21130 23.116 9.28e-13 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0083 - - gmx:102669753 448.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0083 7 723706 725014 Gso7g0083 7 723706 725014 ECH
Gso15g0217 15 1972099 1973607 Gso7g0083 7 723706 725014 PCT
Gso11g3594 11 51638135 51639495 Gso7g0083 7 723706 725014 PCT
Gso7g0083 7 723706 725014 Gso15g0217 15 1972099 1973607 PCT
Gso7g0083 7 723706 725014 Gso11g3594 11 51638135 51639495 PCT