Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3594 ATGACAGACAGGGTGTACCCATCGGCCAAGCCCGCCGCGGTTAACGGCGCCGCCGCCAACCCATCTTTTCCGGCGACTAAGGCTCAACTTTACGGCGCCACACGCCCCACCTACCGCCCTCAGCCCCACCACCGGCGCCGGAGCAAGCGCCGGTGCTGCTGCACCTTCTTCTTCTGGCTGATCCTCACCGTTCTGATCCTCCTCCTCCTGATCGGCGTCGGCGGCACGGTGTTCTACCTCCTCTACCGCCCCCACCACCCCACCTTCACCGTGACGTCGCTGAAACTCTCTTACCTGAACCTCACCTCCTCCTCCAACACCCTTAACTCCCGCTTCGACATCACCGTCTCCGCCACGAACCCCAACAAGAAGATCCTCTTCGCCTACGACCCCACCTCCATCACCATCCTCTCCGCCGACATCGACCTCGGCGACGGCACCGTCCCCGGCTTCCAGCACCCGAAGAAGAACACCACGCTGATCAAAGGCTCCATCCTCAGCTCCGGCCAGGCGCTCCAAAGCGACGAAGCCTCACGCTTGAAGTCCAGCATGAAGAGCAAGAACGGGTTGCCACTCAAAGTGAATTTGGAAACCAAAGTGAAGGCCAAGATGGGAAATTTGAAAACCCCAAAAGTCGGAATCAGAGTCTCCTGCGACGGAATCAGAGTCAGTCTTCCCTCCGGTAAGAAACCGGCGACGGCGTCCACTTCTAACGCCAAATGTGACGTCGATGTTCGGTTCAAGATCTGGAAGTGGACCGTTTGA 765 0.5922 MTDRVYPSAKPAAVNGAAANPSFPATKAQLYGATRPTYRPQPHHRRRSKRRCCCTFFFWLILTVLILLLLIGVGGTVFYLLYRPHHPTFTVTSLKLSYLNLTSSSNTLNSRFDITVSATNPNKKILFAYDPTSITILSADIDLGDGTVPGFQHPKKNTTLIKGSILSSGQALQSDEASRLKSSMKSKNGLPLKVNLETKVKAKMGNLKTPKVGIRVSCDGIRVSLPSGKKPATASTSNAKCDVDVRFKIWKWTV* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3594 254 PANTHER OS05G0199100 PROTEIN 1 253 - -
Gso11g3594 254 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 1 253 - -
Gso11g3594 254 Pfam Late embryogenesis abundant protein 115 218 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3594 Gso-Chr11 51638135 51639495 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3594 27 240 EF-hand Containing Proteins AT5G21130 27.189 1.90e-18 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3594 - - gmx:100784963 424.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0217 15 1972099 1973607 Gso11g3594 11 51638135 51639495 GST
Gso11g3594 11 51638135 51639495 Gso7g0083 7 723706 725014 PCT
Gso7g0083 7 723706 725014 Gso11g3594 11 51638135 51639495 PCT