Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2530 ATGGCCTACCAAAACTCCATCCCCTTCTATGAAAAATACTGGTACAAGCACAATTATAAAAGGGTAACAGATAGCTTGCTTTTAATCCTCCTCTTATCGCTGCTTGGTTACCGCGTTATCTCTATCAACAACTACTCTTTATTCCCTTGGTTTGTTGCCTTTTTATGTGAGTCGTGGTTCACCTTCTCTTGGTTTTTAACCCTAACCACTCAATGGAGTCCAGCAGTAACTAAAACCTACCCACATCGTCTCTTGCAAAGTGTGGAAGAGCTTCCACCAGTGGATTTGTTTGTGACAACAGCAGATCCTGAACTTGAACCACCGATTATCACAGTGAACACTGTGTTGTCTCTGTTGGCACTTGATTACCCACCTCACAAGCTAGCTTGTTATGTTTCTGATGATGGTTGTTCCCCTCGTACCTTCTATGCTCTTCAGGAAGCTTCTCAATTTGCAAAGTTTTGGGTACCTTTCTGTAAGAAGTACCATGTCCAAGTTAGAGCTCCATTCAGATACTTCTCTGACAAACCTGAGGAGGTCTTCGGGGCCAACAACACACCAGAATTCAAACAAGAATGGTTACAAATGAAGGATATGTATGATAATCTTAGCAGCAAAATAGAATTGGATTCATCCATAATATCTAATCCATGTAATGGAGACTTTGCGGTTTTCTCGAACACTGAGAGAACAAATCACCCATCGATAATCCAGGTTATATGGGAGAACAAGGAACACATAGCAGATGGGTTGCCGCATTTGATTTACATATCTAGAGAGAAGAGGCCAAAACAGCCTCATCATTACAAAGCCGGTGCCATGAATGTGTTGACAAGAGTCTCCGGATTGATAACCAATGCTCCCTTTATGCTGAACGTGGATTGTGACATGATTGTAAATAATCCAAAGATTGTTCACCATGCGTTGAGCATTTTGCTTGATCACAAAGGAGAAAAAGAAGTTGCATTTGTTCAATTTCCCCAAAAATTTTATGCTACTTTGAAGGACGACCCTTTTGGAAATCAGATGACAATTTTGGCTAAGTACTTGGCGGCTGGAATAGGTGGACTCCAAGGACCTTTCTACGGGGGAACAAACTGCTTCCATAGAAGAAAAGTTATTTATGGTCTTTCTCCAGAAAACATTGAAAAGGGAAACAGCATATCAGAGGAGGAATTAAAACAAAAATTTGGAACTTCAAAGGAGATTATGAAATCAGTTGCTTGTACTTTGGAAGGGAGAACTTATTCGTATAATGATATTAATATTTCGAACGTTGTTGACGTAGCAAGCCAAGTTGCTGGTTGTGCATATGAATATGGCACTGGATGGGGCAAACAGATGGCTTGGATATATGGATCAGTCACAGAGGATGTGCTCACCGGGCTGACAATACATAAAAAAGGTTGGAGATCAGAATTCTGTATGCCAAGCCCAATTGGCTTCACAGGTTTTGCTCCAGGAGGTGGCCCAAATTCAATGGCCCAACAAAAGAGATGGGCCACAGGATTGCTTGAGATGTTCTTTTGCAAGCATTGCCCTATTATTAGCACACTTTTTCATAAGCTTACTTTAAGACAATGCTTAGCATATATGTGGATTATCAACCACTGGGGCCTAATGTCAGTCTTTGAAGTATGCTATGCATGTCTCCTTGCATATTGCATCATCACCAACTCCAATTTCTTGCCCCAGGACCTAGGCATATGTATTCCCGCTGCTTTTCTAGTAATTTACAAGATATATACTGCATCAGAATATTTGGCAGAAGGGCTATCAATTCGAGCATGGTGGAACAATCAAAGAATGTCAAGAATAACACCTATGAATGCTGGTTTTTGTGCATTTCTTAGTGTCCTACTTAAGCTGTTTAGAATATCTGAAACAGTGTTTGACATAACAAAGAAAGATTTGCCCTCAGCTAAGGATGTTGGAGATGATAAGGATGCTGGAAGGTACACCTTCGATGAGTCCGTAGTTTTCTTACCAGGAACTACCATTTTGTTGGTGCAATTGACAGCAATGGTTATCAAGTTATTAGGGTTCCAACCACCAGTGGCAACTCAGAGTGGGAAACATGGGTGTGGACTAGGTGAGATTTTCTGTAGTGTTTATTTGATAATTTGCTATTGGCCATTTCTAAGAGGATTATTTGAGACAGGAAAGTATAGAATTCCTCTGTCTACAATATTGAAATCAGCTATCTTAACATGTCTCTTTGTACACCTATGTCAAAGGACTGTTCCTGGTTGA 2253 0.4048 MAYQNSIPFYEKYWYKHNYKRVTDSLLLILLLSLLGYRVISINNYSLFPWFVAFLCESWFTFSWFLTLTTQWSPAVTKTYPHRLLQSVEELPPVDLFVTTADPELEPPIITVNTVLSLLALDYPPHKLACYVSDDGCSPRTFYALQEASQFAKFWVPFCKKYHVQVRAPFRYFSDKPEEVFGANNTPEFKQEWLQMKDMYDNLSSKIELDSSIISNPCNGDFAVFSNTERTNHPSIIQVIWENKEHIADGLPHLIYISREKRPKQPHHYKAGAMNVLTRVSGLITNAPFMLNVDCDMIVNNPKIVHHALSILLDHKGEKEVAFVQFPQKFYATLKDDPFGNQMTILAKYLAAGIGGLQGPFYGGTNCFHRRKVIYGLSPENIEKGNSISEEELKQKFGTSKEIMKSVACTLEGRTYSYNDINISNVVDVASQVAGCAYEYGTGWGKQMAWIYGSVTEDVLTGLTIHKKGWRSEFCMPSPIGFTGFAPGGGPNSMAQQKRWATGLLEMFFCKHCPIISTLFHKLTLRQCLAYMWIINHWGLMSVFEVCYACLLAYCIITNSNFLPQDLGICIPAAFLVIYKIYTASEYLAEGLSIRAWWNNQRMSRITPMNAGFCAFLSVLLKLFRISETVFDITKKDLPSAKDVGDDKDAGRYTFDESVVFLPGTTILLVQLTAMVIKLLGFQPPVATQSGKHGCGLGEIFCSVYLIICYWPFLRGLFETGKYRIPLSTILKSAILTCLFVHLCQRTVPG* 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2530 750 SUPERFAMILY Nucleotide-diphospho-sugar transferases 111 529 IPR029044 -
Gso6g2530 750 PANTHER CELLULOSE SYNTHASE H1-LIKE PROTEIN 2 750 - -
Gso6g2530 750 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 224 382 IPR029044 -
Gso6g2530 750 Pfam Cellulose synthase 94 384 IPR005150 GO:0016020|GO:0016760|GO:0030244
Gso6g2530 750 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 2 750 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2530 Gso-Chr6 47035553 47045438 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2530 8 743 Glycosyltransferase AT2G32540 46.518 0.0 650
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2530 - - gmx:100795709 1424.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1618 12 39727580 39735492 Gso6g2530 6 47035553 47045438 PCT