Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2511 ATGTCGTGGCTCCTCCGATCCACCAAGTCTAAGCTCCTCTCTTCCTCTTCCTCTTCCTCTTCTTCTCTTTCTAGAACCTTCCCCTCTCTCCCTCGCCCTCAGATCGGAGCCATCTCTCCCCTCCCCGATCTCTTCCACCGCAACACCGCCACCATGCCTTTCGCTAAGGAAAACGCTTCCGGTGGAAACTTGACTGGTCTTCCCAAAGTTCCCGCGAATAAGCTTGGCAGTGATTCTGATGCGACCAATTCTCCGAGGTACAAAGCTTCTGGACTGAACACCAATGTGCTGGCTGGAGCTAGATATGTCTCTAGAGTTTGGGCTGCACAGGGTCAAATGCCATTGGGAGTCAATACTGTGATGGCTAGAAGTTTTGAGAGAAGTATGGAAGCTGGCACATTGGGAATGATTGGTCATAAACGTTTTATGAGTGACATCCCAAGTAAAACCAGTGAGACAAACCCATCTGGTTTTCGTCCGTTATCTCCTCATCTTCCTCTTTATCAGCCCCAACTTTCTTCGACCCTCTCAATTTTCAATAGAATTGCTGGAGCTTTCCTAGCTGGTGTCATTTTGGTTTTTTATATGATCTATATGAAGTTGGGTTTGGTTAGCCTCACCTATGACTCTTTCTACCAGTTCATATTTTATTCATCGAAACTCAACCTACTTGTCATGGAGATTTCTGCCTTAGCCGTGTCCTATCATCTGTATAGTGCAATTCGTCATTTATTCTTATGA 741 0.4588 MSWLLRSTKSKLLSSSSSSSSSLSRTFPSLPRPQIGAISPLPDLFHRNTATMPFAKENASGGNLTGLPKVPANKLGSDSDATNSPRYKASGLNTNVLAGARYVSRVWAAQGQMPLGVNTVMARSFERSMEAGTLGMIGHKRFMSDIPSKTSETNPSGFRPLSPHLPLYQPQLSSTLSIFNRIAGAFLAGVILVFYMIYMKLGLVSLTYDSFYQFIFYSSKLNLLVMEISALAVSYHLYSAIRHLFL* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2511 246 Pfam Succinate dehydrogenase/Fumarate reductase transmembrane subunit 159 246 IPR000701 GO:0016627
Gso6g2511 246 Gene3D Fumarate reductase/succinate dehydrogenase, transmembrane subunit 144 246 IPR034804 GO:0016020
Gso6g2511 246 PANTHER SUCCINATE DEHYDROGENASE CYTOCHROME B560 SUBUNIT 72 245 IPR014314 GO:0000104|GO:0006099|GO:0009055|GO:0045281
Gso6g2511 246 SUPERFAMILY Fumarate reductase respiratory complex transmembrane subunits 152 245 IPR034804 GO:0016020
Gso6g2511 246 MobiDBLite consensus disorder prediction 55 87 - -
Gso6g2511 246 Gene3D Aconitase, domain 4 34 136 IPR015928 -
Gso6g2511 246 PANTHER SUCCINATE DEHYDROGENASE CYTOCHROME B560 SUBUNIT, MITOCHONDRIAL 72 245 - -
Gso6g2511 246 CDD SQR_TypeC_SdhC 159 246 - -
Gso6g2511 246 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2511 Gso-Chr6 46839699 46843752 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2511 K00236 K03885 gmx:100527396 441.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0813 12 8608700 8612836 Gso6g2511 6 46839699 46843752 GST