Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0813 ATGTCGTGGCTCCTCCGATCCACCAAGTCAAAACTCCTCTCTTCCTCATCTTCACTTTCTAGAACCTTCCCCTCTCTCTCACGCTCCGGCCCCACACTTGACCTCCCTCAGATCGGAGCCATCTCTCCCCTCCCCGATCTCTTCCACCGCAGCACCGCTACCATGCCTTTCGCGAAGGAAAACGCTTCCGGTGGAAACTTGGCCGGTCTTCCCAAAGTTCCTGCGAATACGCTTGGCAGTGACTCTAATGCGATCAATTCTCCGAGGTACAAAGCTTCTGGACTGGACACGAATGTGCTGGCTGGAGCTAGATGTGTCTCTGGAGTTTGGGCTGCACAGGGTCCAATGCGATTGGTAGTCAATACCGTGATGGCTAGAAGTTTTGAGAGAAGTATGGAAGCTGGCACATTGGGAATGATTGGTCATAAACGTTTTATGAGTGACATCCCAAGTAAAACCAGTGAGACAAACCTATCTGGTTTTCGTCCGCTATCTCCTCATCTTCCTCTTTATCAGCCCCAACTTTCTTCGACCCTCTCAATTTTCAATAGAATTGCTGGAGCTTTCCTAGCCGGTGTCATTTTGCTTTTTTATATGATCTATATGAAATTGGGTTTGGTTAGCCTCACCTATGACTCTTTCTACCAGTTCATATTTTATTCATCAAAACTCAACCTGCTTGTCATGGAGATTTCTGCCTTAGCCGTGTCCTATCATCTGTATAGTGCAATTCGTCATTTATTCTTATGA 750 0.4693 MSWLLRSTKSKLLSSSSSLSRTFPSLSRSGPTLDLPQIGAISPLPDLFHRSTATMPFAKENASGGNLAGLPKVPANTLGSDSNAINSPRYKASGLDTNVLAGARCVSGVWAAQGPMRLVVNTVMARSFERSMEAGTLGMIGHKRFMSDIPSKTSETNLSGFRPLSPHLPLYQPQLSSTLSIFNRIAGAFLAGVILLFYMIYMKLGLVSLTYDSFYQFIFYSSKLNLLVMEISALAVSYHLYSAIRHLFL* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0813 249 SUPERFAMILY Fumarate reductase respiratory complex transmembrane subunits 155 248 IPR034804 GO:0016020
Gso12g0813 249 Gene3D Fumarate reductase/succinate dehydrogenase, transmembrane subunit 148 249 IPR034804 GO:0016020
Gso12g0813 249 CDD SQR_TypeC_SdhC 162 249 - -
Gso12g0813 249 PANTHER SUCCINATE DEHYDROGENASE CYTOCHROME B560 SUBUNIT, MITOCHONDRIAL 80 248 - -
Gso12g0813 249 PANTHER SUCCINATE DEHYDROGENASE CYTOCHROME B560 SUBUNIT 80 248 IPR014314 GO:0000104|GO:0006099|GO:0009055|GO:0045281
Gso12g0813 249 Pfam Succinate dehydrogenase/Fumarate reductase transmembrane subunit 162 249 IPR000701 GO:0016627
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0813 Gso-Chr12 8608700 8612836 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0813 K00236 K03885 gmx:100499683 454.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0813 12 8608700 8612836 Gso6g2511 6 46839699 46843752 GST