Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2506 ATGTCCCACTTTGATCCGAAACTCAGCCGTTCCTCCACCCTCCGGCGACGGTTCCACCACCGCGTTTCCCTGCTCCAGCGGTGCCTCCTCCGCGTCCTCCACCGTATCCTCCTCTGCTCCGGAAGCAAGCCCACCAATGCCACGTACAGCATGCTGCCGCCGGCATTGCCCTCTCCGCCGCCGCCGATGGGATCCGACGGCGAGCTTGGTCGTGAAGAGATGGACCTTACTTCGTCGGCGGTGTTTCATACACATGACTTGGACTCTGATTTGGTTTCCTTGAAGATCAGCTTGTTGGGAGATTGCCAAATTGGAAAAACCAGCTTTCTGGAGAAATATGTTGGGGATGAAAAAGATCAGCAGCAAGGGAACCAGAGGGAAGGGTTAAATCAGATGGACAAAACTTTGGTTGTTGAAGGGGCACGTATATCGTATTGTATCTGGGAAGTACAAGGTGATGGAAAATCAGAAGACCAACTCCCAATGGCTTGTATGGACTCCGTGGCAATTTTGATTATGTTTGATCTAACAAGTCGATGCACATTAAACAGTGTCGTGGGATGGTACAAAGAAGCCAGGAAATGGAATCAGACGGCAATCCCAGTGTTGATTGGAACCAAGTTTGATGATTTCATTCAGCTCCCTATTGATTTGCAATGGACCATAGCCAATGAGGCAAGAAAATATGCAAAGGCCCTCAATGCCACCTTGTTCTTTTCAAGTGCAACCTACAACATCAATGTGAACAAGATTTTCAAGTTCGTCACTGCTAAACTCTTTGACCTACCATGGACAGTGGAGAGGAATCTAACTGTTGGGGAACCCATCATTGACTTCTAA 840 0.4857 MSHFDPKLSRSSTLRRRFHHRVSLLQRCLLRVLHRILLCSGSKPTNATYSMLPPALPSPPPPMGSDGELGREEMDLTSSAVFHTHDLDSDLVSLKISLLGDCQIGKTSFLEKYVGDEKDQQQGNQREGLNQMDKTLVVEGARISYCIWEVQGDGKSEDQLPMACMDSVAILIMFDLTSRCTLNSVVGWYKEARKWNQTAIPVLIGTKFDDFIQLPIDLQWTIANEARKYAKALNATLFFSSATYNINVNKIFKFVTAKLFDLPWTVERNLTVGEPIIDF* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2506 279 Pfam Ras family 95 259 IPR001806 GO:0003924|GO:0005525
Gso6g2506 279 Gene3D - 86 269 IPR027417 -
Gso6g2506 279 SMART rab_sub_5 94 262 - -
Gso6g2506 279 SMART rho_sub_3 96 261 IPR001806 GO:0003924|GO:0005525
Gso6g2506 279 PRINTS Transforming protein P21 ras signature 94 115 - -
Gso6g2506 279 PRINTS Transforming protein P21 ras signature 136 158 - -
Gso6g2506 279 PRINTS Transforming protein P21 ras signature 197 210 - -
Gso6g2506 279 PRINTS Transforming protein P21 ras signature 237 259 - -
Gso6g2506 279 MobiDBLite consensus disorder prediction 51 70 - -
Gso6g2506 279 ProSiteProfiles small GTPase Rab1 family profile. 88 279 - -
Gso6g2506 279 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 94 270 IPR027417 -
Gso6g2506 279 PANTHER MONOMERIC G-PROTEIN 45 278 - -
Gso6g2506 279 PANTHER - 45 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2506 Gso-Chr6 46789102 46793010 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2506 K07976 - gmx:100792211 551.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0819 12 8687789 8691435 Gso6g2506 6 46789102 46793010 GST