Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2492 ATGGCCACTAGAGGCCTCAAAATTTGCTTGGCCGTGTCCTCTCTTTTCTTGATCATTCTTGCCATCGTTATTGTGACCTTAATTTTGACCATCTTTAAACCCAAGAACCCAGATATATTTCTCCACCCAGTTGACCTAGAAAACTTTCAATTGCTTTCACCTAATACAACTAGTGCACCCTTAGGCATAGTGATCACAATTGTGAACCCTAATTATGGAAACTTCAAGTACGTGAATTCCAGTGGCTATCTTAAATATCGTGACACCATTATAGCCGAAGTTCCATTGGGGATAAGATCATTCCCTGCTCGTAGCACTACCAATGTGAGCACTACTGTGGGTATTATGACCGATAAATTGATACAAGATCCAAAGTTTTTGTCAGATATTGAAGGTGGGGTGTTCAATTTGACAGCAGAGGCCACACTTCCTGGGAAAGTGACCATGATCAAGATTTTAAGGCTTAAGGCCAAGATTTATATCTCTTGTGGCGTCTCTTTCAACATAATTACCGTGGATGCTAGTTCCAGCTGCATGTCCAAAATCAAATTGTGA 555 0.4072 MATRGLKICLAVSSLFLIILAIVIVTLILTIFKPKNPDIFLHPVDLENFQLLSPNTTSAPLGIVITIVNPNYGNFKYVNSSGYLKYRDTIIAEVPLGIRSFPARSTTNVSTTVGIMTDKLIQDPKFLSDIEGGVFNLTAEATLPGKVTMIKILRLKAKIYISCGVSFNIITVDASSSCMSKIKL* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2492 184 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 1 183 - -
Gso6g2492 184 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 1 183 - -
Gso6g2492 184 SUPERFAMILY LEA14-like 32 124 - -
Gso6g2492 184 Pfam Late embryogenesis abundant protein 65 156 IPR004864 -
Gso6g2492 184 Gene3D - 31 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2492 Gso-Chr6 46681963 46682760 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2492 - - gmx:100306568 331.257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1646 12 40066161 40066529 Gso6g2492 6 46681963 46682760 PCT
Gso11g3222 11 47960132 47960866 Gso6g2492 6 46681963 46682760 PCT
Gso6g2492 6 46681963 46682760 Gso12g1646 12 40066161 40066529 PCT
Gso6g2492 6 46681963 46682760 Gso11g3222 11 47960132 47960866 PCT