Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3222 ATGGCTTCTAGAGGCCTAAAAATTTGCTTGGCTGTGTCTCTACTCTTGTTGATCATTTTTACAATTGCAATTGTGACCTTATTTATGACCATCTTTAAGCCCAAAAATCCTGAAATCACTGTCCACCCTGTTGGTCTAGAAGACTTTCAATCTTCCTTTTCACCCAATTTGACCCTAAATGTGACTCTAGGCATGATAATTACTATAAGAAATCCAAACTATGGAAGCTTCCAGTACATAAACTCCACTAGTTATGTGAAATTTCATGATACCGTGGTAGCTGAAGTTCCAATTGAAGCAGAGTTAGTCCCAGCACGTAGCCAAATTAATGTGAACACTTCAGCAGATTTTATGGTAGCAAAGTTAATCAATGATCCTAATTTTTTGTCAGATGTTCTAGGTGGAACTTTGAATTTCACATCAACAATTGCACTTCCTGGGAAAGCCCGAACTACATTTGTATTGGAGTATATATATGCCTTCTTTGGCATTAAAGAATATGCCGGTATCATGTACAAGTAG 522 0.3716 MASRGLKICLAVSLLLLIIFTIAIVTLFMTIFKPKNPEITVHPVGLEDFQSSFSPNLTLNVTLGMIITIRNPNYGSFQYINSTSYVKFHDTVVAEVPIEAELVPARSQINVNTSADFMVAKLINDPNFLSDVLGGTLNFTSTIALPGKARTTFVLEYIYAFFGIKEYAGIMYK* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3222 173 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 3 151 - -
Gso11g3222 173 Pfam Late embryogenesis abundant protein 67 151 IPR004864 -
Gso11g3222 173 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 3 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3222 Gso-Chr11 47960132 47960866 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3222 - - gmx:100808471 340.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1646 12 40066161 40066529 Gso11g3222 11 47960132 47960866 GST
Gso11g3222 11 47960132 47960866 Gso6g2492 6 46681963 46682760 PCT
Gso6g2492 6 46681963 46682760 Gso11g3222 11 47960132 47960866 PCT