Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2483 ATGACCCTTGTCAATTCCACGTTGCTTAATTCCTCTTTCATTTCAAATTTTAGTTTTGGCAAACCTCAGAAACCAGAAGGGACTAATAACCTTCTCCTGCGTAGAATTATTTGCCCTATCCGATGCAACGCAACAACCACCACCACAAACGTTAATGCTTCTGAAAGAAAATCAGCCAATTACCAGCCAAACCTCTGGAATTACGATTTTCTGCAGTCTTTGAAGTGTGACCATGCGGATATAAGATATGAGGACAAGGCCAAGAAGCTGCTAGAGGAAGTGAGGAGAATGATAAAGGATGAAAATACAGATATATGGATCAAACTTGAACTCATTGACGATGTGAAACGCTTGGGAATTGGCTACAGTTTTGACATGGAGATAGGAGAAGCCCTTCATAGGTGCCTCTCTTCTGAAACATTTATTGATACAATCACTCATAATCACAGAAGCCTGCATGAAACTGCTTTAAGCTTCAGGGTCCTCCGAGAATATGGCTATGATGTCACAACGGATATATTTGAGAGGTTTAAGGACTATAATGGTAATTTCAAGGCAATCCTTAGCAGAGATGTGAAGGGAATGTTGAGTCTATACGAGGCATCATTTCTAAGTTATGAAGGAGAACAGATTTTGGATGAGGCTAAGGCCTTCACTAGCTTCCATCTAAAGGGTGCCCTCAAAGAAGGTAGAAGCAATACTATGATCTTAGAACAAGTGAATCATGCAATGGAGCTTCCACTTCATCACAGAATCCAAAGGCTTGAAGCAAGGTGGTATATTGAATCTTATGCTAAAAGAAAAGATGCAAATATGGTGCTGCTTGAAGCAGCAAAACTGGATTTCAATATTGTGCAGTCAACTCTGCAAACAGATCTCCAAGAAATGTCAAGGTGGTGGAAAGGGATGGGACTAGCCTCAAAGTTAAGCTTCAGCCGAGATAGGCTAATGGAATGCTTCTTTTGGACGGTTGGAATGGTCTTTGAGCCTCAATTGAGTGATCTTCGCAAAGGTTTAACAAAAGTGGCTTCCTTAATTACTACAATTGATGACGTTTATGATGTGTATGGAACCTTGGATGAATTAGAACTTTTTACAGCAGCAGTAGAAAGTTGGGATGTTAAAGCAGTTCAAGTTCTACCGGATTACATGAAGATATGCTTTCTAGCACTCTACAACACTGTCAATGAATTTGCTTATGATGCACTTAAAGAGCAAGGACAAAATATTCTTCCCTACCTCACCAAAGCATGGTCTAATATGTTGAAAGCATTCCTAGAAGAAGCTAAGTGGTCCCGGGACAAACACGTGCCAAAATTTGACGATTACCTCAATAATGCATGGGTTTCAGTCTCTGGGGTTGTTATACTGACCCATGCCTATTTCTTGCTAAATCATAGCATAACAAAGGAGGCACTTCAGTCCTTGGAAAATTACCATGCCTTGCTGCGGAGATCATCCACTATTTTTCGACTTTGCAATGATTTGGGCACTTCAAAGGCCGAGTTAGAGAGAGGTGAGGCAGCAAGTTCGATTGTGTGTTACATGCGTGAAAGTGGTGCTAGTGAAGAGGGTGCTTACAAACACATCCGCAGATTACTTAATGAAACGTGGAAGAAGATGAACAAAGATAAAGTGTCACAGTCTCCTTTCCCAAAACCTTTCATAGAAATAGCTATCAACCTTGGAAGAATTTCTCAGTGCACATACCAATACGGAGATGGGCATGGAGCTCCAGATAGCACAGTCGAGAATCGCATACGATCCTTGATAATTGAACCCATTGCCATCTAG 1794 0.4103 MTLVNSTLLNSSFISNFSFGKPQKPEGTNNLLLRRIICPIRCNATTTTTNVNASERKSANYQPNLWNYDFLQSLKCDHADIRYEDKAKKLLEEVRRMIKDENTDIWIKLELIDDVKRLGIGYSFDMEIGEALHRCLSSETFIDTITHNHRSLHETALSFRVLREYGYDVTTDIFERFKDYNGNFKAILSRDVKGMLSLYEASFLSYEGEQILDEAKAFTSFHLKGALKEGRSNTMILEQVNHAMELPLHHRIQRLEARWYIESYAKRKDANMVLLEAAKLDFNIVQSTLQTDLQEMSRWWKGMGLASKLSFSRDRLMECFFWTVGMVFEPQLSDLRKGLTKVASLITTIDDVYDVYGTLDELELFTAAVESWDVKAVQVLPDYMKICFLALYNTVNEFAYDALKEQGQNILPYLTKAWSNMLKAFLEEAKWSRDKHVPKFDDYLNNAWVSVSGVVILTHAYFLLNHSITKEALQSLENYHALLRRSSTIFRLCNDLGTSKAELERGEAASSIVCYMRESGASEEGAYKHIRRLLNETWKKMNKDKVSQSPFPKPFIEIAINLGRISQCTYQYGDGHGAPDSTVENRIRSLIIEPIAI* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2483 597 Gene3D Farnesyl Diphosphate Synthase 63 584 IPR008949 -
Gso6g2483 597 CDD Terpene_cyclase_plant_C1 56 594 IPR044814 GO:0010333|GO:0016102
Gso6g2483 597 SFLD Isoprenoid Synthase Type I 271 596 - -
Gso6g2483 597 PANTHER OS04G0344100 PROTEIN-RELATED 46 596 - -
Gso6g2483 597 Pfam Terpene synthase, N-terminal domain 66 244 IPR001906 GO:0010333|GO:0016829
Gso6g2483 597 Gene3D - 103 270 IPR036965 GO:0010333|GO:0016829
Gso6g2483 597 SFLD Terpene Cyclase Like 1 C Terminal Domain - Enzymatic 271 596 - -
Gso6g2483 597 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 62 269 IPR008930 -
Gso6g2483 597 Pfam Terpene synthase family, metal binding domain 275 540 IPR005630 GO:0000287|GO:0010333|GO:0016829
Gso6g2483 597 PANTHER TERPENE SYNTHASE 12-RELATED 46 596 - -
Gso6g2483 597 SUPERFAMILY Terpenoid synthases 272 595 IPR008949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2483 Gso-Chr6 46579069 46584288 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2483 K12742 K19968 gmx:100782452 1164.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1665 12 40245197 40249319 Gso6g2483 6 46579069 46584288 PCT