Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1665 ATGTCTGCACATGTAATGGCTGTTACAGGACTTAGAGTTTCATCGTTTACAAGCTCACTTGCTTCATGCCCATCCATTTATCAACCATGGAACCTATCGTTACAGACATCTAAACGAGGGACGATTCATAATAACTTGTCCATCAAGTGCGTTGCTTTCAATGACAACAAGGTGCCCAGTCAAATTGATCTTCGGACAAACAATTTTGAGCAAGTTAAAAGAAACAGCCAAATGGCGTTGCTAAACTCAAGTGATCCAATCAAAATATTGAAGATGATTGACACCATCCAAAGGTTAGGAATTGAGCATCATTTCAAAGAAGAGATCAACGTACAACTTGGAAAGGTAGGAGATTGGGATGTCACTCAAGACCTCTTTGGCACAGCCCTTCAATTTCGCCTACAAAGACATAATGGCTGGCCTAGTTGTTCTGATGTTTTCAAGAAATTTTTGGACAAGAGTGGGACTTTCAAGGAATCAATCACCAATGACATTTGGGGTATGTTAAGTCTATACGAGGCATCATATTTAGGTGCAAAAGGTGAAGAAGTATTACAACAGGCCATGGACTTCTCCAAGGCTCATCTACACCAGTCACTCCCACACCTAAGTCCTGAACTACGAAAGCTTGTTGCCAAAGCCTTAACACTTCCAAGGCACCTAAGAATGGGTAGGTTAGAAGCCAGGAACTACATGGAAAAATATAGCCAAGCAACTAACCAAATACCTGCTCTTATGGAATTGGCAAAGTTAGACTTTGCCATGGTTCAATCAATGCACCAAAAAGAATTAGCAGAAATCTCCAGGTGGTGGAAAAACTTGGGACTTGTTGAAAGACTTGGCTTTGCCAGAGATAGACCAGCAGAGTGCTTCCTATGGACAGTGGGGACTTTTCCAGAACCACGCTATTCAAATTGTCGCATTGAACTTACAAAAACCATATGCATTTTGCTAGTTATGGATGATATTTTCGACACTTATGGCACATTAGAAGAACTTGTTCTTTTTACCGAGGCAATCAAAAGGTGGGATCTTGATGCGATGGAGCAATTGCCTGAATATATGAAGATATGCTATATGGCATTATTTAACACCACCCATGAAATTGCATATAAAATTCAAAAAGAGCACGGACAAACCGTTGTTGCTTGCTTGAAAAGAACATGGATAGACATATTTGAAGCTTTTCTAAAAGAAGCCAAATGGTTCAACAACGGATACATCCCAACTTTTAAGGAATATTTGGATAATGGGGTGATTTCTTCAGGATCATACATGGCCTTGGTGCATGCAACTTTTCTCATTGGGGATTCCCTATCAAAGGAAACCATTTCCATTATGAAGCCATACCCAAGGCTTTTCTCTTGCTCTGGGGAAATTCTTAGGCTTTGGGACGACTTGGGAACCTCAAGGGAGGAACAAGAAAGAGGAGACAATGCTTGCAGCATACAGTGTCTCATGACGGAGAATAATCTTTCAGATGAAAATGTTGCCAGGAAACATATAAGGCAACTAATACAAAACTTGTGGCCAGAGCTAAATGGTCTTGCTATGACCACAACCGCTCTGCCTTCGTCGGTTATGAAGGCTTCTCTTAACATGGCTAGAACTGCTCAGGTTATTTATCAACATGGAGATGATCAAAACACATTTACAGTTGATGATTATGTGAAAACATTGATCTTGACACCTTCTTCCAACTATTGA 1707 0.4048 MSAHVMAVTGLRVSSFTSSLASCPSIYQPWNLSLQTSKRGTIHNNLSIKCVAFNDNKVPSQIDLRTNNFEQVKRNSQMALLNSSDPIKILKMIDTIQRLGIEHHFKEEINVQLGKVGDWDVTQDLFGTALQFRLQRHNGWPSCSDVFKKFLDKSGTFKESITNDIWGMLSLYEASYLGAKGEEVLQQAMDFSKAHLHQSLPHLSPELRKLVAKALTLPRHLRMGRLEARNYMEKYSQATNQIPALMELAKLDFAMVQSMHQKELAEISRWWKNLGLVERLGFARDRPAECFLWTVGTFPEPRYSNCRIELTKTICILLVMDDIFDTYGTLEELVLFTEAIKRWDLDAMEQLPEYMKICYMALFNTTHEIAYKIQKEHGQTVVACLKRTWIDIFEAFLKEAKWFNNGYIPTFKEYLDNGVISSGSYMALVHATFLIGDSLSKETISIMKPYPRLFSCSGEILRLWDDLGTSREEQERGDNACSIQCLMTENNLSDENVARKHIRQLIQNLWPELNGLAMTTTALPSSVMKASLNMARTAQVIYQHGDDQNTFTVDDYVKTLILTPSSNY* 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1665 568 SFLD Isoprenoid Synthase Type I 244 564 - -
Gso12g1665 568 SUPERFAMILY Terpenoid synthases 243 562 IPR008949 -
Gso12g1665 568 Pfam Terpene synthase family, metal binding domain 246 510 IPR005630 GO:0000287|GO:0010333|GO:0016829
Gso12g1665 568 Gene3D Farnesyl Diphosphate Synthase 66 550 IPR008949 -
Gso12g1665 568 Pfam Terpene synthase, N-terminal domain 68 215 IPR001906 GO:0010333|GO:0016829
Gso12g1665 568 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 70 238 IPR008930 -
Gso12g1665 568 SFLD Terpene Cyclase Like 1 C Terminal Domain 244 564 IPR034741 -
Gso12g1665 568 PANTHER OS04G0344100 PROTEIN-RELATED 55 564 - -
Gso12g1665 568 CDD Terpene_cyclase_plant_C1 55 564 IPR044814 GO:0010333|GO:0016102
Gso12g1665 568 Gene3D - 84 241 IPR036965 GO:0010333|GO:0016829
Gso12g1665 568 PANTHER R-LINALOOL SYNTHASE PROTEIN-RELATED 55 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1665 Gso-Chr12 40245197 40249319 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1665 - - gmx:100807904 1149.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1665 12 40245197 40249319 Gso6g2483 6 46579069 46584288 PCT