Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2482 ATGGAAGCTTGTTGCTGCAACCTTGAAGTAGATGTAAATGGAGAAGAGACTTTCATGGTGGACAAGACTGTTATTACTCAGTATTCAAACAAATTTGCTAGACTATTTGGAAAGTCTAGTGGTGCCACAGGAAAGCTTAAAGTAATATTCCATGATTTTCCAGGAGGTGCTGAAGGCTTTGAGCTTATGTTGAAATTCTGTTACAACAATGGAACAGCTGATATAAACCCTTCCAATTTGTTTCTTGCACGTTGTGCTGCTGAGTACATGGAAATGAAGGAACCCATGGCTGATGTTTCTAACTTGTTGGAGCAAACTGAAAAGTCACTCCAAGAGATTAGCTATTGGACTTGGTCAGATATTTTGATTGGTCTGAAACAGTGCCAGAGTTTACTAGTTCCAGATTCTTCTGTGATGGTAGAGAGATGCTTGGATACTATTGTGGGGAGACTTGTTTTGGCCAGTGAAGCAAGTCCTTGTCCATCAACTAGTTCCACAGACAGTTCTTGGGTTCGGTATTCGTGCGACTCTAAGAGCACCGAGAGTGTAAAAACAAGTTTCTCTCGTTTAACATGGTGGTTTGAAGATCTCCTGTTTTTGAGTCCCTTGTTGGTTGCAATGTTGGTTAAGTCAATGCTTTTGCGAAAGATGGACCATCTTGTGATCAGCAAGTTTCTTCTCTACTATCAGAAGGCCAAATTTTCTACTGCTACTACACATGAGAAGTGCAAGATCATAGAAATGGTCATAGATATGCATTATGATATGGATCTAAGTTGTGTTCCTTGCAAAACTTTGTTTGGGATTTTGAGGGTTACTTTGGGATTGAACATAAGCAAATGTAGCAGGAATAAGTTGGAGACTATGATTGGTTCCCAGTTGGATCAAGCAACCTTGGACAATTTGCTTGTTCCATCTCCTCATGGAATAAGCTATTTATATGATGTGAACCTTATTTTGAGATTTTTGAAGGCATTCTTGCGGCGAGGAAATAGTCTAGTCACTCCCATTCGGATGAGGAAAGTTGCTAGCTTAATAGATTTGTATATAGCAGAAATAGCTCCTGATCCTTGTTTAAAAACTTCAAAGTTCTTGGCTCTTGCCACAGCAATTCCCGATTCTGCAAGAGATTCTTATGATGAGCTCTACCATGCAATGGACATGTATCTTGAGGTGCATACTCAATTGTCCCAGGAAGAAAGATTGAAGATATGCTGTGGTTTAAATTTTGAGAAGCTTTCACCTCAAGCTTGCCTACACCTTTCTCAGAACAAAAAATTTCCTTCAAAATCGACTGTTCAAGCTCTTATCTCTCAACAATCTAAGCTAAAAAATTTACTCCATGTCATTCCCAGTACATCTTCATACAATGATTCACCTTGCAGCTCCAGTGGTGCTGCTGCTCAAAAGGGAAAGAAAGACAAAACCAGTGAACAAGTTGTGTTGTATTCTGGCAATTTTGATCTTTCTACAGACAATGAGAAACTCAAAGCACATTTACAAGGAATGCAGTGGAGGGTCATGGAGTTAGAGAAATTCTGTAGGAAAATGCAAATCCAAATGGCAAAGATCACAAAATCAAAAGCATCAGGCCATAGTTATGCAAAATCTTTGCCCAAGCTATGCTCTTGA 1632 0.394 MEACCCNLEVDVNGEETFMVDKTVITQYSNKFARLFGKSSGATGKLKVIFHDFPGGAEGFELMLKFCYNNGTADINPSNLFLARCAAEYMEMKEPMADVSNLLEQTEKSLQEISYWTWSDILIGLKQCQSLLVPDSSVMVERCLDTIVGRLVLASEASPCPSTSSTDSSWVRYSCDSKSTESVKTSFSRLTWWFEDLLFLSPLLVAMLVKSMLLRKMDHLVISKFLLYYQKAKFSTATTHEKCKIIEMVIDMHYDMDLSCVPCKTLFGILRVTLGLNISKCSRNKLETMIGSQLDQATLDNLLVPSPHGISYLYDVNLILRFLKAFLRRGNSLVTPIRMRKVASLIDLYIAEIAPDPCLKTSKFLALATAIPDSARDSYDELYHAMDMYLEVHTQLSQEERLKICCGLNFEKLSPQACLHLSQNKKFPSKSTVQALISQQSKLKNLLHVIPSTSSYNDSPCSSSGAAAQKGKKDKTSEQVVLYSGNFDLSTDNEKLKAHLQGMQWRVMELEKFCRKMQIQMAKITKSKASGHSYAKSLPKLCS* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2482 543 ProSiteProfiles NPH3 domain profile. 191 442 IPR027356 -
Gso6g2482 543 SMART BTB_4 6 107 IPR000210 GO:0005515
Gso6g2482 543 Gene3D Potassium Channel Kv1.1; Chain A 2 117 IPR011333 -
Gso6g2482 543 ProSiteProfiles BTB domain profile. 6 70 IPR000210 GO:0005515
Gso6g2482 543 PANTHER OS12G0117600 PROTEIN 12 543 IPR043454 -
Gso6g2482 543 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN 12 543 - -
Gso6g2482 543 SUPERFAMILY POZ domain 5 102 IPR011333 -
Gso6g2482 543 Pfam NPH3 family 191 418 IPR027356 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2482 Gso-Chr6 46562249 46566156 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2482 18 523 EF-hand Containing Proteins AT3G44820 27.160 2.53e-53 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2482 - - gmx:100784792 1067.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0838 12 9086940 9090946 Gso6g2482 6 46562249 46566156 GST