Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2440 ATGAGGAAAAATGTCGGTTCTCATTCAGGAAGGATGTTTAGTGATAGGAAGTGGATTCTCCCCTTTTTTGCAAGTTTGATTATATCTATGAGTCTAGTTCTGACAGCCATTCTTGGATTACTTAGTTCTGATGGCGGGGGAGAACAGTCACCGTTTGAAATCATTTCCTTCAAGAGATCAGAGGATTCAAGTGGATATTTTGTGGAATCAGATATACAAAGGTCCTTAAATGTTAGTGTGGTGAAGAGGGAGGCACCGAGGTTTGCATATCTTATTTCAGGCACCAAGGGTGATAGCCGTAGGATGATGAGAACACTAGAAGCTGTGTACCACCCAAGGAATCAATACATCTTGCATTTAGATCTTGAGGCGCCGCCACGGGAAAGGTTGGAATTGGCAAATGCAGTGAAAGCTGATCCAATATTTCGTGAGGTGGAGAATGTGCGTGTTATGTCTCAATCAAATTTGGTAACTTATAAGGGTCCTACAATGATTGCTTGTACCCTCCAAGCTATTGCAATATTATTGAAGGAAAGTTCAGAGTGGGACTGGTTTATTAACCTCAGTGCCTCAGATTATCCTCTTATGACACAGGATGATTTGCTTCATGTTTTCTCAAATCTGTCAAGAAATATCAATTTCATTGAACACACACGCATTGCTGGTTGGAAACTGAACCAAAGAGCAAGACCCATCATTATTGACCCTGCTCTTTACTTATCAAAGAAATCTGATTTAGCATTGACTACTCAACGAAGAACACTTCCGACGTCTTTTAAACTGTTTACTGGCTCAGCTTGGGTTGTACTGACTCGGTCCTTTGTGGAGTATTGTATATGGGGATGGGATAACTTTCCACGGACTATGCTAATGTATTACACAAATTTTATCTCCTCGCCAGAGGGATATTTTCACACTGTCGTTTGTAACACTGAGGAATTCCGTCACACGGCGGTAAACCATGATCTTCACTACATTGCTTGGGACACTCCTCCAAAGCAGCATCCCATCTCTTTAACTATGAAGGACTTTGACAAAATGGTTAAAAGCAAGGCACTCTTCGCGCGCAAATTTGCAAAGGAGGATCCTGTGCTAGACAAGATTGACAAAGAACTTCTGGGGCGCACACATAGATTTTCACCTGGTGCATGGTGTGATGGGAACACAGATGGTGGGGCAGACCCTTGTTCTGTTCGTGGCAATGATACAATGTTTAGGTCAGGACCTGGTGCTGAGAGGCTACGTGAGCTGCTTCAGGTGCTGTTATCTAAAGAATCTCTAAGCAAGCAGTGTTTGTGA 1299 0.4265 MRKNVGSHSGRMFSDRKWILPFFASLIISMSLVLTAILGLLSSDGGGEQSPFEIISFKRSEDSSGYFVESDIQRSLNVSVVKREAPRFAYLISGTKGDSRRMMRTLEAVYHPRNQYILHLDLEAPPRERLELANAVKADPIFREVENVRVMSQSNLVTYKGPTMIACTLQAIAILLKESSEWDWFINLSASDYPLMTQDDLLHVFSNLSRNINFIEHTRIAGWKLNQRARPIIIDPALYLSKKSDLALTTQRRTLPTSFKLFTGSAWVVLTRSFVEYCIWGWDNFPRTMLMYYTNFISSPEGYFHTVVCNTEEFRHTAVNHDLHYIAWDTPPKQHPISLTMKDFDKMVKSKALFARKFAKEDPVLDKIDKELLGRTHRFSPGAWCDGNTDGGADPCSVRGNDTMFRSGPGAERLRELLQVLLSKESLSKQCL* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2440 432 PANTHER BNACNNG43180D PROTEIN 5 425 - -
Gso6g2440 432 PANTHER GLYCOSYLTRANSFERASE 5 425 IPR044610 GO:0015020
Gso6g2440 432 Pfam Core-2/I-Branching enzyme 88 347 IPR003406 GO:0016020|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2440 Gso-Chr6 46097843 46103041 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2440 1 431 Glycosyltransferase AT4G03340 66.129 0.0 599
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2440 - - gmx:100816318 876.315
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0884 12 9892231 9897042 Gso6g2440 6 46097843 46103041 GST